Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02161 ATGCAGGTCACTCTTTCACCTCTCACCCCTTCCCTCTCTCTCTACAAATCTCGCTCTTCTCTATCCTCTCTTCCCTCATTCAATCCCATTCTCAACCCTTCTATCTCTTCTTCTTCCTCTTCCTTCCCGTCATGCACACCAATCGTTTCCTCTTCTTTTTCTTCCAAATTCATCTCTCTGACACCCCTCCATTCCTCCAACAACAACACCTTTCACACCAAAGCAAGCGTCACCGCCGCCGCAGACTCCTCCTCCTCCTCCTCCAGCAGCAGCCTCTTCAAAACTCTAGAGCTCGGCGTCCTCTTTTGTCTCTGGTTCTCCTTTAACATATACTTCAATATCTACAACAAACAGGTCTTGAAGGTTTACCATTTACCTGTAACTATCACGGCTTTTCAATTTGCCATTGGAACACTCCTTGTAACATTCATGTGGGGTCTTAACCTATATAAAAGACCAAAAATCACTTCTTCACAGCTTTTAGCAATATTTCCATTGGCTTTGGTACATACATTAGGGAACCTTTTCACAAACATGAGCCTTGGAAAGGTTGCTGTTTCTTTTACTCATACTGTCAAATCAATGGAGCCTTTCTTTTCTGTCCTTATGTCTTCTATGTTCCTTGGAGAGATGCCTACAGCATGGGTGGTTGCTTCCCTTGTGCCTATTGCAGGTGGAGTGGCGCTGGCGTCTGCTACGGAGGCCTCATTCAATTGGATTGGGTTTTTGAGTGCTATGGCTTCCAATTTGACAAATCAATCTCGTAATGTTCTTAGCAAAAAACTCATGGTTAGCAAGGAGGAATCCATGGACAACATAACACTCTTCTCAATAATAACAGTCATGTCATTCTTCCTATCAGTACCTCTAACTATCTTCATGGAGGGTGTCAAATTTACCCCTTCTTACCTGCAATCCGCAGGATTAGATGTTCAACAAGTGTATATTAGATCTCTTCTCGCTGCACTGTGTTTCCACGCGTATCAGCAAGTTTCTTATATGATACTGGAGAGAGTATCACCTGTTACTCATTCAGTAGCAAACTGCGTGAAGCGAGTGATTGTAATTGTGAGCTCTGTCATTTTTTTCCAAACACCAGTCTCACCGATTAACGCATTAGGAACTGGTATAGCTCTTTCTGGTGTTTTTCTATATTCCAGGGTGAAAGGAATTAAGCCAAAGACAGAATAA 1191 0.4282 MQVTLSPLTPSLSLYKSRSSLSSLPSFNPILNPSISSSSSSFPSCTPIVSSSFSSKFISLTPLHSSNNNTFHTKASVTAAADSSSSSSSSSLFKTLELGVLFCLWFSFNIYFNIYNKQVLKVYHLPVTITAFQFAIGTLLVTFMWGLNLYKRPKITSSQLLAIFPLALVHTLGNLFTNMSLGKVAVSFTHTVKSMEPFFSVLMSSMFLGEMPTAWVVASLVPIAGGVALASATEASFNWIGFLSAMASNLTNQSRNVLSKKLMVSKEESMDNITLFSIITVMSFFLSVPLTIFMEGVKFTPSYLQSAGLDVQQVYIRSLLAALCFHAYQQVSYMILERVSPVTHSVANCVKRVIVIVSSVIFFQTPVSPINALGTGIALSGVFLYSRVKGIKPKTE 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02161 396 PANTHER SOLUTE CARRIER FAMILY 35 98 390 - -
Vivi1g02161 396 Pfam Triose-phosphate Transporter family 97 386 IPR004853 -
Vivi1g02161 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 231 - -
Vivi1g02161 396 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 96 394 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vivi1g02161 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 310 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02161 Vivi-Chr1 45563641 45566253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02161 64 396 Antiporters AT5G33320 72.156 7.08e-172 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02161 K15283 - jre:109004219 504.597