Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02153 ATGCAAAATATCAACATTTTACGCGGAATCATCATAATATCCTCATTGTTGTCATGTATAACTTGCTTCTACAATGACGCTGCGGTGCACGAAGCTGGTCTCACCTGTGGTTCTTATCAATACCCTGGTGATAGTGCTGGCATCAGCTTAATGCAAAGCTTGATGGTTACAATGGACGCGTTATCCTTCCAGGTGAAACAACATGGATGGGGAGCACAAACATTAGTCGGAAATTGGCATCCGATGTACGCGTTAGGCGAATGTCGTCGCGATCTCAATCCAGCGCAATGCTACACTTGTTTCATACAAGCAAGACAGTTGTTATCGAGGTGCATGCCGAAGGTTTCGGGTAGAATTTACCTCGACGGTTGTTTTCTTCGTTATGATAACTATACTTTCTTTGATGAGGGTGTGGACTTCACGCATGATACCACAACGTGTTCGGCGGAAAAGGGGGGGACGGTTGGTCCGATACATGTTGGAGTGGTGATTGGGAATGTGAGTAAAGGTGCCGGGGAACATATGTTCGCGGTGAACGAGGAGGGTGGTGTTTTCGGATTGGCGCAGTGTTGGGAGACGGTTGATAAATGGAGTTGCCAGAGGTGTTTGAGAGAAGCAGGGAAGAGAGTGCAGGAATGTATTCCTAGTTCTGAGGGTACAAGCTTGTTTACCGGTTGTTTTATGAGGTATTCAACGCGTAAATTCTATAACGGCATCTTTGTGCGGAATGATACTTGGACTGGTATTCCTCCTCCTCCTCTTCCTCCTCGAGAAAAAAAGGGCGTATGGATAATCGCTGCATGCATAATGTCAGTAATTGTGGTAATCTTATTTATCGTCCCACTCATATTTAGGCGCAAGAAGAGTACAACACCGCATGAAAAAAGAAACAACAATTTTGGCGCGTCGCCTAGTTTTGCCAACGTAACTGGTTTTAGTTTTAGGTACGACGTGCTAGAAAGGGCGACAAGTTATTTCGATCCTGCAAACAAATTAGGCCTAAGTGGAGGCGAGGGTTCTGTGTTCAAAGGAACACTCCCCTCAGGAAGAATGGTTGCTGTCAAACGTTTGTTTTTCGATACAAGACAGTGGACAGACGTGTTGTTCAACGAGGTCAATTTGATAAACGGAACTCAACATAAGAATGTGGTGAAACTTTTGGGTTGCAGCATTGATGGCCTTGAAAGCCTCTTGGTTTATGAATTTCTTCCCTGGAAAAGTCTTGATCAAATCCTTTTCGATAAGGACTCAGAACATGCGCTACCTTGGGAGAAACGGTTTCAAATCATATGCGGGATAGCCGAGGGCTTAGCATATCTTCATGAAGGATCCGGAACAAAGATCATTCACAGAGACATAAAGCCTAGCAACATTCTACTCGATGAGGCTCTAAATCCAAAAATTGTTGATTTTGGTTTTTCTCTTGGTAGTGCTGAAAATACATCTCATCTTAACACTAGAATCACATATAAGGCTCCAGAGTGTCTCAACAAAGGAGAATTAACAGAGAAGGCAGATGTATATGCTTTTGGTGTGATGGTTACTGAAATTGTTAGTGGTAAAAAGAACAGTGCTTTCCCACAAAGCTCAAATTCAGTACTCCAATGTGCGTGGAAGAATTACAAGGCAAACAACATTACAACATCAGTTGATCCTGCTCTACTTGGAAATTTTGTGGCAGAAGAGGCATCAAATGCTCTCCAAGTTTCACTTCTTTGTACACAATCTTCTCCTCCTCTTAGACCATCAATGTCAGAAGTAGTTCAAATGCTAACAAAAAAAGACTACAATATTCCCATCCCAATACAACAACCATTCATCAATTATACTAGGCATACTCGAGATAACCGAACCGCTTCCACCGTGAGCTTTGCGTCAATTGGACATGCAAGTTCAAGGTCATCTTTCCATAGCACGACTAGTTCGTTACACCAAGGTGAAGAGGTGACACTTTTAGAGAATTCATTTTCTTCTTCTTCTAAGTTCAACAGTTCAAGGAGTCCTGATTCAGATATTCAAGTAAACATTGTGTTAGCTCAACCAAGAGTGGCATCATGA 2058 0.4271 MQNINILRGIIIISSLLSCITCFYNDAAVHEAGLTCGSYQYPGDSAGISLMQSLMVTMDALSFQVKQHGWGAQTLVGNWHPMYALGECRRDLNPAQCYTCFIQARQLLSRCMPKVSGRIYLDGCFLRYDNYTFFDEGVDFTHDTTTCSAEKGGTVGPIHVGVVIGNVSKGAGEHMFAVNEEGGVFGLAQCWETVDKWSCQRCLREAGKRVQECIPSSEGTSLFTGCFMRYSTRKFYNGIFVRNDTWTGIPPPPLPPREKKGVWIIAACIMSVIVVILFIVPLIFRRKKSTTPHEKRNNNFGASPSFANVTGFSFRYDVLERATSYFDPANKLGLSGGEGSVFKGTLPSGRMVAVKRLFFDTRQWTDVLFNEVNLINGTQHKNVVKLLGCSIDGLESLLVYEFLPWKSLDQILFDKDSEHALPWEKRFQIICGIAEGLAYLHEGSGTKIIHRDIKPSNILLDEALNPKIVDFGFSLGSAENTSHLNTRITYKAPECLNKGELTEKADVYAFGVMVTEIVSGKKNSAFPQSSNSVLQCAWKNYKANNITTSVDPALLGNFVAEEASNALQVSLLCTQSSPPLRPSMSEVVQMLTKKDYNIPIPIQQPFINYTRHTRDNRTASTVSFASIGHASSRSSFHSTTSSLHQGEEVTLLENSFSSSSKFNSSRSPDSDIQVNIVLAQPRVAS 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02153 685 Gene3D Phosphorylase Kinase; domain 1 305 402 - -
Vivi1g02153 685 Gene3D - 35 133 IPR038408 -
Vivi1g02153 685 Gene3D - 163 235 IPR038408 -
Vivi1g02153 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Vivi1g02153 685 ProSiteProfiles Gnk2-homologous domain profile. 138 235 IPR002902 -
Vivi1g02153 685 Pfam Salt stress response/antifungal 179 232 IPR002902 -
Vivi1g02153 685 Pfam Salt stress response/antifungal 57 131 IPR002902 -
Vivi1g02153 685 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Vivi1g02153 685 FunFam Lectin-domain containing receptor kinase A4.3 403 611 - -
Vivi1g02153 685 SMART serkin_6 326 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02153 685 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 626 - -
Vivi1g02153 685 Pfam Protein kinase domain 330 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02153 685 Gene3D Transferase(Phosphotransferase) domain 1 404 600 - -
Vivi1g02153 685 ProSiteProfiles Protein kinase domain profile. 327 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02153 685 SUPERFAMILY Protein kinase-like (PK-like) 312 623 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02153 Vivi-Chr1 45364074 45367183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02153 16 637 Receptor kinase-like Gene Family AT1G70520 37.809 3.09e-131 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi1g02153 Pkinase 1.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02153 - - mtr:25493752 856.284