Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02146 ATGGAAGTTCCCAAATCCCCTTCCAAAGATAAACGATTCGGAAACAAGCATAAATTGTTGTTTAAAACCGGTGCTGTCATTTTCATCCTTATTCTCTTGTTTCTGGGTTTTTATCTCGAGGCTTATAGCTCGAAACCCAACACGTCATCGTATTACACTGTTGTTATAGACTGTGGAAGCACAGGGACACGGGTTAATGCATATGAATGGATGTTAGGGAGTGTTGTAGGTAATAGAAATTTGCCGGTTTTGCTGCATTCATATCCTGATGGTAATGCAACAAATAGGAATAGTTCGTTTTGGAAAACCTCTTGTCAATATCATTGTATGCAAACCGAACCCGGGTTAGATAAACTGGTTAATGATTCTTTAGGAGTCAGACAAGCTTTGGAGCCTTTGATTGTTTGGGCGGAAAGTTTAGTTCCTCGAGAAATGCACGGTGATACGCCGATTTTTGTTCTGGCTACTGCTGGACTGAGGAGGCTTAAGAGGGAGGATGTGTTTCGGGTTTTGGAGGATGTGGAGGCTGTTGTGAAAGATCACTCTTTTATGTTTGACAGGAGATGGATTAGGGTATTGAGTGGGAGGGAGGAAGCTTATTATGGGTGGGTGGCTTTGAATTACAAAATGGGTAGCTTTGATGATGATCATCAGGGGTCTTCTACTTTGGGACTTGTTGATTTGGGTGGCTCGTCGTTGCAGATTGTGGTGGAGATTGATCGTGCTACTGGGGATGATGTGAACGCGATGAGATCGGAGTTCGGATCAATTGAACATAGGATTGTGGCGTACTCGTTGCCTGCATTTGGGTTGAATGAAGCGTTTGATAGAACTGTTGTTATGCTTAGAAATAATCAGAGTGCAGAAAGCACCAGAGGTATATCTGAACTCAGACATCCTTGTCTGATGTCTACTTTCGTACAAAACTATACCTGCTCTTATTGCTCGGGACTTGATGCCACTGACCAAAAAAATCATAGCCAACCCCAGAACTCTTTAAGTCTTACTGGGGAGCCTGATTGGGAACAATGCAGAGAAATAGCTATTGCTGCTGCTATGAACTTGAGCGATTCCCAAGTGTCACATCAGGCAGTTGGTTCAAATTGCCAAGCAAGTATGTTTTCTGGTATTGGCACTGATGCACTTAACTCAACAGCAGTTGCTCACCCAACGAAGCGATTCCATGCTTTATCTGGTTTCTTTTTTGTCTACAACAAGCTAAATTTGAGCCCAAGAGCCAATTTAACAACAATTTGGGAGTCAGGCAAGCAAATATGTTCAAATTTATGGGCTGGCTTGAGCAGTATATCTGACAATCCAAATTATGCTGGACAATTTTGTTTCCGCGTGGCTTATATGGCATCACTGATCGAGCATGGTCTATGTCTCGGTGATGTAGAAATGGAATTCGGTCCAGGGGATGTTTCCTGGACATTAGGAGCTGCATTGGTTGAAGGGAAATTTCAATGGTTAAATATTGCAAACCACAAATCCCAAACTGTAATTTCAGCTTTAAAGAATGTGAAGGTCATGTCTTCTTCAACTTGTCTTTTTGCTGTCCTTCTGTTGCTTTTATTGATTGTTTATTGTACTCAAATTAAGCTACCTATGCCAAGCAGAAGAGCGTCTGCTCCTGGCTCGTCTTTGCCATCACATACTCATACAAGACATCGAGCTAACTAA 1683 0.4219 MEVPKSPSKDKRFGNKHKLLFKTGAVIFILILLFLGFYLEAYSSKPNTSSYYTVVIDCGSTGTRVNAYEWMLGSVVGNRNLPVLLHSYPDGNATNRNSSFWKTSCQYHCMQTEPGLDKLVNDSLGVRQALEPLIVWAESLVPREMHGDTPIFVLATAGLRRLKREDVFRVLEDVEAVVKDHSFMFDRRWIRVLSGREEAYYGWVALNYKMGSFDDDHQGSSTLGLVDLGGSSLQIVVEIDRATGDDVNAMRSEFGSIEHRIVAYSLPAFGLNEAFDRTVVMLRNNQSAESTRGISELRHPCLMSTFVQNYTCSYCSGLDATDQKNHSQPQNSLSLTGEPDWEQCREIAIAAAMNLSDSQVSHQAVGSNCQASMFSGIGTDALNSTAVAHPTKRFHALSGFFFVYNKLNLSPRANLTTIWESGKQICSNLWAGLSSISDNPNYAGQFCFRVAYMASLIEHGLCLGDVEMEFGPGDVSWTLGAALVEGKFQWLNIANHKSQTVISALKNVKVMSSSTCLFAVLLLLLLIVYCTQIKLPMPSRRASAPGSSLPSHTHTRHRAN 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02146 560 Gene3D - 40 193 - -
Vivi1g02146 560 Pfam GDA1/CD39 (nucleoside phosphatase) family 47 487 IPR000407 GO:0016787
Vivi1g02146 560 Gene3D Exopolyphosphatase. Domain 2 194 470 - -
Vivi1g02146 560 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 25 486 IPR000407 GO:0016787
Vivi1g02146 560 MobiDBLite consensus disorder prediction 541 560 - -
Vivi1g02146 560 ProSitePatterns Lysosome-associated membrane glycoproteins duplicated domain signature. 515 529 IPR018134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02146 Vivi-Chr1 45281457 45285517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02146 16 485 Nodulin-like Gene Family AT4G19180 35.208 1.69e-89 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02146 - - vun:114175521 796.193