Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02101 ATGGAACTGAAACGCTATTTGTTGGAATGTATTCCATATGCAGCAATGGTGATCGTAGAGATTCTTGATGTTGGGTTGACCACATTGAGTAAAGTAGCTATGTCCACTAGAGGAATGAATCACTTTGTCTTTGTTCTTTACTCCAATGCTCTTGCCACTTCCATTCTCCTCCCTTCTTCTTTCCTCATCAACAGGACAACAAGACCACCATTGTCTTTCTCACTTCTTGTCAAATTCTTCCTCCTCGGCCTCGTCGGCATAACTATAATGCAGAACTGTGTATTCACTGGCATAAGCTATAGCTCTCCCACCCTTGGATCTGCTATGAGCAACTTGACACCAGCAATCACTTTTGTCCTAGCAGTCATCTTCAGGATGGAGAAGTTGAATGTTGGAAGCTCAATAAGCCAGATCAAAATGGTGGGGACAGTACTGTCTATCTCAGGAGCATTGCTAGTGACCCTTTACAAAGGTGCTCCCATTCGCAGCTTTCGAACTCAACCCTCGACACCGCAACAGTTCCCGACTCTTTTTGAAGAAACCAGTAACTGGGTCATTGGAGGTCTCTTTCTATTCACTGCCTCTTTATCTCTTTCCATATGGAATATTGCTCAGGCAGCAATTCTTAGAGGATATCCATCTCAATTGACCATAGTAGCATTCTATTGCCTGTTTGGAACAATCCAATGTGCAGTACTTTCTCTAATTGCAGTCAAAGATCGAAATGCTTGGAATCTCAATGCTGGCATTGAGCTTATCTCTATAATATATTCAGCTGTTTTTGGAAGTGTGGTGACATTTTCTGTGATGACTTGGTGCATAGAGAGGAAAGGACCTGTATTTGTTTCCATGTTTAAACCTGTTGGAATTGCCATTGCTGCCTTTATGAGTGCTGCCTTCCTTGGTGAAACACTTCACGTTGGCAGTGTCATTGGAGCAGTGGTAATCGCCATTGGATTTTACACAGTTATGTGGGCACAATCAAAAGAGGGAAATGTGAATGGCCCAGAAGTTAATGGATCATTATCATCCTCATCTGCCGAAGAAAGTCCTCTACTAGAGTCTCGGTGA 1071 0.4286 MELKRYLLECIPYAAMVIVEILDVGLTTLSKVAMSTRGMNHFVFVLYSNALATSILLPSSFLINRTTRPPLSFSLLVKFFLLGLVGITIMQNCVFTGISYSSPTLGSAMSNLTPAITFVLAVIFRMEKLNVGSSISQIKMVGTVLSISGALLVTLYKGAPIRSFRTQPSTPQQFPTLFEETSNWVIGGLFLFTASLSLSIWNIAQAAILRGYPSQLTIVAFYCLFGTIQCAVLSLIAVKDRNAWNLNAGIELISIIYSAVFGSVVTFSVMTWCIERKGPVFVSMFKPVGIAIAAFMSAAFLGETLHVGSVIGAVVIAIGFYTVMWAQSKEGNVNGPEVNGSLSSSSAEESPLLESR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02101 356 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Vivi1g02101 356 Pfam EamA-like transporter family 24 154 IPR000620 GO:0016020
Vivi1g02101 356 MobiDBLite consensus disorder prediction 336 356 - -
Vivi1g02101 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 157 - -
Vivi1g02101 356 PANTHER WAT1-RELATED PROTEIN 12 331 IPR030184 GO:0016020|GO:0022857
Vivi1g02101 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02101 Vivi-Chr1 44430183 44432235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02101 4 353 Nodulin-like Gene Family AT5G40240 45.352 1.28e-89 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02101 - - psat:127073896 591.267