Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02091 ATGTCGCTCAAAAGGGGTCCCGATGATAACAAGAGTTCGGATGATAAGCGGAGAAAGCCTCCTCCTTTTTGTAGTGTGGTGCGCGAGGTGATGAAGTTACAATCAGTTAGGAATTTGATGGAGCCGATTCTAGAGCCGTTGGTTCGTCGAGTGGTTAAGGAGGAAGTTGAATTGGCCCTAAAGAAGCATTTGAACAGCATGAAACAAACCTGTGGAAAGGAGCTGCATACTTTAGAAACAAGAACTTTGCAGCTGCAGTTTGAAAACAGCATTTCTCTCCCTGTCTTTACAGGAGCTCGAATTGAAGGAGAGGACGGCTCAACATTAAGGATACGTTTAATCGATGCCGTAACAGGGAAGGTTGTTTGTACAGGACCTGAATCTTCAGCTAAGGTGGAAATTGTAGTCCTTGAAGGTGATTTTGAAGAAGAAAGTGACATTTGGTTGCCTGAAGATTTCAAGAACAATATTGTGAGAGAGAGGGAGGGGAAAAAGCCGCTCCTTACAGGAGAAGTTATTTTATATCTTAAAGACGGGGTTTGTATGATGGGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGGAGCCGTCGGTTCAGGCTTGGCGCAAGAGTAGTGGACAACTTTGAGGGTATTAGAATAAGAGAAGCAAAGACAGATTCATTTATTGTCAGGGATCACAGAGGAGAATTGTACAAGAAACACCACCCTCCAAGTCTTTCGGATGAAATTTGGAGACTGGAAAAGATAGGCAAAGATGGGGCTTTCCACAGGCGTTTGAGTCGTGAAAAGATCCGTACCGTTAAAGATTTTCTCACACTACTCAATCTCGATCCAGCAAAGTTGCGAACTATATTAGGCACTGGGATGTCTGCAAAGATGTGGGAAATAACTGTAGAGCATGCTCGGACTTGCGTCCTTGATCCAACAAGGCATGTGTCATCTCAACAACCTCGTGTAGTCTTCAATGCCGTGGGACAAGTGACAGGACTGCTCTCTGAATGCGAATATATCGCTGTAGATAAGCTGTCTGAAACTGAAAAGGCTGATGCTCAAATATCGGTTCTTTCTGCACTTAGCCAAGGCGATTATACCTCTTTCGAAGACGAAGCCTCCTTAATGGATGGTTATTCACACTTAACTAATGCACATTACTCTCCGAGAACCGAGGGATCAAGTGCTAACAAGCTTTTGGCTTCTCAAAAGATTACAGGATTCAATTACACACAAGAAAGTGCATCTTCAACTGATATCATGCCGTCCATGTATTCTGTTGGTGGAAGTAGTGGCTTGGACGACTATGGTTTACCAAATTTCGACAGCATTGGCCTTAGATACGATCAGAATCTTGGTTTTCCACTCCAAGTACCCAACTCTTTGATCTGTGACACGGATTCAATAGTCCATGCTTTCACTGATGAAGATCATCTACAATTTTTCGAGGCCGATCTTCAATCTCAGTGTCAGATTGAAGCAGATTTACAGAGTGCTGTTGATAGCTTCATGCTGGCACCTTCTACATCTATGGCTAACGGAAAAGCTCGGAGACGGTGGAGAAAGGTAGTCAACGTTCTAAAATGGTTCTTGGTGAGGAAGCGACGAACCCAGTTATATAGGTAA 1623 0.4338 MSLKRGPDDNKSSDDKRRKPPPFCSVVREVMKLQSVRNLMEPILEPLVRRVVKEEVELALKKHLNSMKQTCGKELHTLETRTLQLQFENSISLPVFTGARIEGEDGSTLRIRLIDAVTGKVVCTGPESSAKVEIVVLEGDFEEESDIWLPEDFKNNIVREREGKKPLLTGEVILYLKDGVCMMGEISYTDNSSWTRSRRFRLGARVVDNFEGIRIREAKTDSFIVRDHRGELYKKHHPPSLSDEIWRLEKIGKDGAFHRRLSREKIRTVKDFLTLLNLDPAKLRTILGTGMSAKMWEITVEHARTCVLDPTRHVSSQQPRVVFNAVGQVTGLLSECEYIAVDKLSETEKADAQISVLSALSQGDYTSFEDEASLMDGYSHLTNAHYSPRTEGSSANKLLASQKITGFNYTQESASSTDIMPSMYSVGGSSGLDDYGLPNFDSIGLRYDQNLGFPLQVPNSLICDTDSIVHAFTDEDHLQFFEADLQSQCQIEADLQSAVDSFMLAPSTSMANGKARRRWRKVVNVLKWFLVRKRRTQLYR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02091 540 Pfam Calmodulin binding protein central domain 240 306 IPR046830 -
Vivi1g02091 540 PANTHER OS02G0177800 PROTEIN 4 382 IPR012416 GO:0005516
Vivi1g02091 540 MobiDBLite consensus disorder prediction 1 22 - -
Vivi1g02091 540 Pfam Calmodulin binding protein C-terminal domain 315 363 IPR046829 -
Vivi1g02091 540 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02091 Vivi-Chr1 44317030 44321634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02091 5 350 Calmodulin-binding Proteins AT5G62570 62.678 1.60e-157 452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02091 1 44317030 44321634 Vivi1g02091 1 44317030 44321634 ECH