Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02073 ATGTCTCCCGCCGGTGAAATTTTCCGGTCGAATTTGACGGAGTTGTTAGAGGAATCTCCTTCAGGTGCCGATGAATTGCACGTGCTTGCTGTTGATGATAATCTCGTTGATCGCAAGGTTATTGAACGTTTGTTAAAGATTTCTTCATGCAAAGTTACTGTTGTGGAGAGTGCAAGAAGAGCTCTTCAGTATTTGGGATTGGATGGAGAGAATACTGATATAGGGTTTGATGGTGTGAAGGTTAATCTGATAATGACGGATTATTCCATGCCTGGGATGACAGGGTATGAACTACTCAAGAAAATCAAGGAGTCTTCTGTTTTTCGAGAGATTCCGGTGGTGATCATGTCGTCCGAAAATGTTTTGACTCGAATTGATAGATGCCTTGAGGAAGGAGCCGAGGATTTTCTATTAAAGCCAGTCAAGTTGTCGGATGTAAGACGCTTGAAAGATTTTGTCATGAGAGGTGAAGTGAAGGATGGCGAGAAAATTTCTCTAAAAAGAAGACGCTCATCAGATGATTGTACTCCATCTCTATCGGCTACATTCTCACCAATCCGTCATTCATGCGATCCACCATCATCAGTGTTCTCACCACTCTCACCACCACCATTATCCTCCAAGAAATCTAGACTGTGA 639 0.4272 MSPAGEIFRSNLTELLEESPSGADELHVLAVDDNLVDRKVIERLLKISSCKVTVVESARRALQYLGLDGENTDIGFDGVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFVMRGEVKDGEKISLKRRRSSDDCTPSLSATFSPIRHSCDPPSSVFSPLSPPPLSSKKSRL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02073 212 Pfam Response regulator receiver domain 28 147 IPR001789 GO:0000160
Vivi1g02073 212 CDD REC_typeA_ARR 28 149 - -
Vivi1g02073 212 MobiDBLite consensus disorder prediction 186 212 - -
Vivi1g02073 212 SUPERFAMILY CheY-like 25 153 IPR011006 -
Vivi1g02073 212 ProSiteProfiles Response regulatory domain profile. 27 154 IPR001789 GO:0000160
Vivi1g02073 212 SMART REC_2 26 150 IPR001789 GO:0000160
Vivi1g02073 212 Gene3D - 26 184 - -
Vivi1g02073 212 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 167 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02073 Vivi-Chr1 43924618 43926501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02073 5 179 Response Regulator Gene Family AT3G48100 65.730 1.01e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi1g02073 Response_reg 5.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02073 K14492 - gmx:100796843 300.827