Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02072 ATGTCTCCCGCCGGTGAAATTTTCCGGTCGAATTTGACGGAGTTGTTAGAGGAATCTCCTTCAGGTGCCGATGAATTGCACGTGCTTGCTGTTGATGATAATCTCGTTGATCGCAAGGTTATTGAACGTTTGTTAAAGATTTCTTCATGCAAAGTTACTGTTGTGGAGAGTGCAAGAAGAGCTCTTCAGTATTTGGGATTGGATGGAGAGAATACTGATATAGGGTTTGATCAGGGTGTGAAGGTTAATCTGATAATGACGGATTATTCCATGCCTGGGATGACAGGGTATGAACTACTCAAGAAAATCAAGCAGGAGTCTTCTGTTTTTCGAGAGATTCCGGTGGTGATCATGTCGTCCGAAAATGTTTTGACTCGAATTGATAGATGCCTTGAGGAAGGAGCCGAGGATTTTCTATTAAAGCCAGTCAAGTTGTCGGATGTAAGACGCTTGAAAGATTTTGTCATGAGAGGTGAAGTGAAGGATGGCGAGAAAATTTCTCTAAAAAGAAGACGCTCATCAGATGATTGTACTCCATCTCTATCGGCTACATTCTCACCAATCCGTCATTCATGCGATCCACCATCATCAGTGTTCTCACCACTCTCACCACCACCATTATCCTCCAAGAAATCTAGACTGTGA 645 0.4295 MSPAGEIFRSNLTELLEESPSGADELHVLAVDDNLVDRKVIERLLKISSCKVTVVESARRALQYLGLDGENTDIGFDQGVKVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFVMRGEVKDGEKISLKRRRSSDDCTPSLSATFSPIRHSCDPPSSVFSPLSPPPLSSKKSRL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02072 214 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 169 IPR045279 GO:0009736
Vivi1g02072 214 ProSiteProfiles Response regulatory domain profile. 27 156 IPR001789 GO:0000160
Vivi1g02072 214 SMART REC_2 26 152 IPR001789 GO:0000160
Vivi1g02072 214 MobiDBLite consensus disorder prediction 188 214 - -
Vivi1g02072 214 Gene3D - 26 186 - -
Vivi1g02072 214 CDD REC_typeA_ARR 28 151 - -
Vivi1g02072 214 SUPERFAMILY CheY-like 25 155 IPR011006 -
Vivi1g02072 214 Pfam Response regulator receiver domain 28 149 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02072 Vivi-Chr1 43924618 43926502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02072 5 181 Response Regulator Gene Family AT3G48100 65.000 2.73e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi1g02072 Response_reg 5.7e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02072 K14492 - gmx:100527518 299.286