Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02071 ATGTCTCCCGCCGGTGAAATTTTCCGGTCGAATTTGACGGAGTTGTTAGAGGAATCTCCTTCAGGTGCCGATGAATTGCACGTGCTTGCTGTTGATGATAATCTCGTTGATCGCAAGGTTATTGAACGTTTGTTAAAGATTTCTTCATGCAAAGTTACTGTTGTGGAGAGTGCAAGAAGAGCTCTTCAGTATTTGGGATTGGATGGAGAGAATACTGATATAGGGTTTGATGGTGTGAAGGTTAATCTGATAATGACGGATTATTCCATGCCTGGGATGACAGGGTATGAACTACTCAAGAAAATCAAGCAGGAGTCTTCTGTTTTTCGAGAGATTCCGGTGGTGATCATGTCGTCCGAAAATGTTTTGACTCGAATTGATAGATGCCTTGAGGAAGGAGCCGAGGATTTTCTATTAAAGCCAGTCAAGTTGTCGGATGTAAGACGCTTGAAAGATTTTGTCATGAGAGGTGAAGTGAAGGATGGCGAGAAAATTTCTCTAAAAAGAAGACGCTCATCAGATGATTGTACTCCATCTCTATCGGCTACATTCTCACCAATCCGTCATTCATGCGATCCACCATCATCAGTGTTCTCACCACTCTCACCACCACCATTATCCTCCAAGAAATCTAGACTGTGA 642 0.4283 MSPAGEIFRSNLTELLEESPSGADELHVLAVDDNLVDRKVIERLLKISSCKVTVVESARRALQYLGLDGENTDIGFDGVKVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFVMRGEVKDGEKISLKRRRSSDDCTPSLSATFSPIRHSCDPPSSVFSPLSPPPLSSKKSRL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02071 213 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
Vivi1g02071 213 SUPERFAMILY CheY-like 25 154 IPR011006 -
Vivi1g02071 213 CDD REC_typeA_ARR 28 150 - -
Vivi1g02071 213 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 168 IPR045279 GO:0009736
Vivi1g02071 213 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Vivi1g02071 213 Gene3D - 26 185 - -
Vivi1g02071 213 SMART REC_2 26 151 IPR001789 GO:0000160
Vivi1g02071 213 MobiDBLite consensus disorder prediction 187 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02071 Vivi-Chr1 43924618 43926505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02071 5 180 Response Regulator Gene Family AT3G48100 65.363 6.91e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi1g02071 Response_reg 4.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02071 K14492 - gmx:100527518 303.908