Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02061 ATGGCCGCCAATCTCACCAACCTCACCATCCCTCCTCCTCCTTCTTCTTCTTTTTCTTCTTCCCTTCCCGCAATTGATCCCTCTCCACAAGTCATCCACAGTAGGTCCCACTCCTTCGTCGGTCCCTCCCCTCGCCTCCCCCCTCCCTCCGACTCCCTCTTCTTCCTCGATGAACTCGCTTCCAACTCCGACTCCGACTCCGACGACCAATCCCAACAACCCTTCCAACACAAATTTGGACCCTCCGATTTCCAAATTCTCAAAGTCATAGGACAAGGTGCCTTTGGCAAAGTCTTCATGGTCAGAAGAAAAGGCGATTCGGATTCTCCCGACGCTGATGGAATCTTCGCTATGAAGGTTATGAGAAAAGACAACATCATTAAGAAAAACCACGTTGATTACATGAAAGCCGAGAGAGATATTCTCACTAAAGTTCTTCATCCTTTCATCGTTCCTCTTCGCTACTCTTTCCAAACTAAATCTAAATTATATTTGATTTTGGACTTCATAAATGGAGGACATCTTTTCTTTCAATTATGTCGACAAGGCATTTTTAGTGAGGATGAGGCAAGGATTTATACTGCTGAGATTGTATCTGCTGTTTCACATCTTCATAGCAAAGGCATCGTGCATCGGGATCTTAAACCTGAAAACATACTCATGGATTCTCATGGCCATGTGATGTTAACTGATTTTGGAATGTCGAAAGAGATAGAGGAATCTGAGAGATCTAACTCTTTGTGTGGGACTACAGAGTATATGGCTCCGGAAATTCTTTTGGGTAAAGGTCATAACAAGGATGCAGATTGGTGGAGTGTTGGTGTTCTCTTGTATGAAATGATAACCGGGAAGGCACCATTTATACATAATAACAGAAAGAAGCTACAGGAGAAAATTATCAAAGAGAAAATTAAACTTCCCCCGTACCTTACTGGTGAAGCTCATTCTTTGCTCAAAGGATTGCTGCAAAAGGATCCGTCTACAAGGCTAGGCAGCGGGCCAAATGGAGATGAACAGATCAAAAATCATAAGTGGTTCAGGACAATCAATTGGAACAAATTGGAGGCAAGAGAATTGCAACCGAAGTTTAAACCATCTGATGTGTCTGGAAAAGATTGCACCGCTAATTTTGATCGATGTTGGACGACAATGCCGCTTGAGGACTCTCCAGCATCAACTCCTACAGCAGGTGACCATTTTCAGGGCTATACTTATGTTGCACCAAATCCTTGGCTTTCTTCTAGATAA 1248 0.4343 MAANLTNLTIPPPPSSSFSSSLPAIDPSPQVIHSRSHSFVGPSPRLPPPSDSLFFLDELASNSDSDSDDQSQQPFQHKFGPSDFQILKVIGQGAFGKVFMVRRKGDSDSPDADGIFAMKVMRKDNIIKKNHVDYMKAERDILTKVLHPFIVPLRYSFQTKSKLYLILDFINGGHLFFQLCRQGIFSEDEARIYTAEIVSAVSHLHSKGIVHRDLKPENILMDSHGHVMLTDFGMSKEIEESERSNSLCGTTEYMAPEILLGKGHNKDADWWSVGVLLYEMITGKAPFIHNNRKKLQEKIIKEKIKLPPYLTGEAHSLLKGLLQKDPSTRLGSGPNGDEQIKNHKWFRTINWNKLEARELQPKFKPSDVSGKDCTANFDRCWTTMPLEDSPASTPTAGDHFQGYTYVAPNPWLSSR 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02061 415 Pfam Protein kinase domain 84 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02061 415 SUPERFAMILY Protein kinase-like (PK-like) 69 375 IPR011009 -
Vivi1g02061 415 Pfam Protein kinase C terminal domain 368 405 IPR017892 GO:0004674|GO:0005524|GO:0006468
Vivi1g02061 415 ProSitePatterns Protein kinases ATP-binding region signature. 90 119 IPR017441 GO:0005524
Vivi1g02061 415 Gene3D Transferase(Phosphotransferase) domain 1 170 365 - -
Vivi1g02061 415 FunFam Non-specific serine/threonine protein kinase 82 191 - -
Vivi1g02061 415 MobiDBLite consensus disorder prediction 1 51 - -
Vivi1g02061 415 SMART pkinase_C_6 347 407 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vivi1g02061 415 PANTHER RIBOSOMAL PROTEIN S6 KINASE 65 409 - -
Vivi1g02061 415 ProSiteProfiles Protein kinase domain profile. 84 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02061 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Vivi1g02061 415 Gene3D Phosphorylase Kinase; domain 1 82 390 - -
Vivi1g02061 415 ProSiteProfiles AGC-kinase C-terminal domain profile. 347 415 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vivi1g02061 415 MobiDBLite consensus disorder prediction 1 37 - -
Vivi1g02061 415 SMART serkin_6 84 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02061 415 FunFam Non-specific serine/threonine protein kinase 170 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02061 Vivi-Chr1 43496802 43499684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02061 11 408 AGC Kinase Gene Family AT3G08720 60.284 1.97e-180 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Vivi1g02061 Pkinase 3.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02061 K04688 - gmx:100798259 620.157