Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01999 ATGGAAGCTGCCACTGTGGTAATAGATGGAAATAAGACTGAAACTAGACATATAGTTGTCACAACTATTGTTTCAAGATCCATAGGTGATGCATATTTGAAGAAAGTGGAATTCAATAGGGAGCCTCTGCCACAAAAGTTTAGACTACCTGAAACCTTTATCAAGCTGATTCTTAGTAGTGAATCATCGGTATCAATTCATAAAATCCAACCCGAAGATAAATTCCGCATCTTTGCTTCTGATGGTTTATGGGAGCATCTTAGCAACCAAGCAACTGTCAATATAGTTAACCTTAATCCACACAACAGATATTAG 315 0.3714 MEAATVVIDGNKTETRHIVVTTIVSRSIGDAYLKKVEFNREPLPQKFRLPETFIKLILSSESSVSIHKIQPEDKFRIFASDGLWEHLSNQATVNIVNLNPHNRY 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01999 104 Gene3D - 2 103 IPR036457 -
Vivi1g01999 104 ProSiteProfiles PPM-type phosphatase domain profile. 1 104 IPR001932 -
Vivi1g01999 104 SUPERFAMILY PP2C-like 21 98 IPR036457 -
Vivi1g01999 104 PANTHER PROTEIN PHOSPHATASE 24 100 IPR015655 GO:0004722|GO:0006470
Vivi1g01999 104 Pfam Protein phosphatase 2C 24 99 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01999 Vivi-Chr1 42284523 42285084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01999 24 102 PP2C-type Phosphatase Gene Family AT3G12620 70.886 7.45e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01999 K01102 - vvo:131621862 208.764