Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01898 ATGGAAGAAGAGAATAAAGAGGTTATTATGAAACATTCATGTAATTTCTTCTCCCTCTTTATTCTCCTTCTTCTTCATCATCTCTTCTTTATTCCATTCACGTGTGCTTACAATTCCATTACTACTGATTCTCTTACTGATTCCACGTTCACGCCTTCTGTTAATTATCTAATTGATTGTGGCTCCTCCAGTAAAACTCATCTACGAGACGGTAGAATCTTTAAATCTGATCCTGACACCACTTCTTTTCTTTCAACAACAGAAGATATTCAAATTTCAGTTGATTCAATAAACCTAGCAAACACCTCTTATTCATCGGCATTACCTTTATATGAAACTGCTAGGGTTTTCACAGAAGATACTACGTACAGTTTTTACATCTCCAAAACTGGTAGACTTTGGGTTCGTCTTTACTTTTTTCCTCTTCCTAACCCTACATACAATCTATCTAGTTTTGTTTTCTCGGTTCATACCGATCGCCTTGTACTCTTGCATGAATTCTCTCAGAGAAATAATGATTCACTTGTTTTCAAGGAATATCTTCTTAATGTTACTGACCATAGGTTTTCTCTTAAGTTCAAACCGAGGAAAAGTTCGTTTGCGTTTATCAATGCAATTGAAATTGTTTCAGCTCCGGATATACTTATATCGGATTCAGCAATTCAAGTTTCTCCGTCGCTCGGGAAGTTTAGTGGTTTGATGAATTCAGCTTTGCAAGTTTCTTATCGAATAAATGTTGGTGGCCCGCCGATAACTCCTGAGAATGACACATTGTCAAGAACATGGGAGTCTGATGATCCATACAACGTTTTTCCACAAGGCTCTATGAGTGTTTCTATCCCAAGCAAAAGAATAAAGTATCCTCAAACAAGTGATTTTATTGTTACGCCCTTGATTGCTCCGAATTCGGTATATGCAACTTGTGTACAAATGGAGGATCCTGAAGTTATGCAACCGAATTTCAATCTTAGTTGGATGGTGAATGTGGAAGAAAAATACTCTTATTTGGTAAGATTGCATTTTTGCGACATTGTTAGCCGAGGTCTTGATCAGTTGTATTTCAATGTGTACATCAATGGGATTGAGGGTGTGCCAGCTTTGGACCTTTCATATGAAACCAAAGCTCTATCAACAGCTTATTACAAGGACTTTGTGATTGGTCCCTCTAATATCACAAATGGCTCTATCGTGATTCAGGTAGGACCGACGAATCATAAACAAGACATATCCAATGCAATTTTGAATGGATTTGAGGTAATGAAAATGAGCAATAGTGCAGATAGTTTGGATGGTTTTTTCTCTGTGGATGGAGAATACAAAGGACCAAACTTAACAACCAAGCTAAAGAAACTTGTGGCTATTATTGGTTTTTTTTTGGCTGTGATATCATTGTTGTTACTAGGAGTGATGTATGTTAGGTGGTTAAAGAGACCTTTATGTTGGGAAGAAAGTAGAGATTTCTTTTCATGGCTCTTTCCTCTTCGTTCAAAATGTAACATGAGTTGCAGCATATATTCAAACAAATATGAGTCACCTAAGAGCAAGCATGGTGGTGGTCATTCTATTCATCACTCTCCAAGAAGAGGGTCGAAAAGGTTCTTTCATTTCATCGAATTGCAACGAGCGACAAACAATTTCGATGAAAAGAAGGTTCTTGGTGTTGGAGGCTTTGGTAAAGTGTACCTCGGAACGTTGGACGATGGAAGGCGTGTTGCTATAAAAAGAGGAAGTGGTAGTTCAGGACAAGGGATGAATGAGTTTATAACAGAACTTAACATGCTTTCAAAGCTGAGACATCGCCACTTAGTTTCGCTAGTAGGCTTCTGTGATGAAAACTCAGAGATGGTTCTTGTTTATGATTATGTCTCTAATGGCCCTTTTCGTTCGCATCTCTATGGCTCCAACTATTCTCCTTTGTCATGGGAAAAGAGGCTTGAGATATGCATCGGCGCTGCTCGCGGTTTGCATTATCTGCATACAGGTGCATCTCAAAGTATCATACACCGTGACGTGAAGACAACGAATATCCTCTTGGATGAGAATTATGTAGCCAAGGTTGCTGATTTTGGTTTGTCTAAAACAATCCATGACAAAGCTCAAATAAGCACCGCGGTTAAGGGTAGTTTTGGATATCTTGATCCCGAGTATTTCAAAAGCCAACAACTGACTCAAAAATCAGATATATACTCATTTGGCGTAGTACTCTTCGAGGTATTGTGTGCTAGGCCAGTTATTTGTCCAACATTGCCAATGGAACAAGCTAATTTGGCTGATTGGGTAGTGAAACAACATAAACTAGGTATTCTTCATAAGGCGGTCGATCCGCGCATTTCTTATAACATGAATCCTGAATCATACAAGATTTTTGTACAGCTTGGTGTGAAATGTTTATCGGAAAGTGGCGTCGATAGGCCTAGTATGGGTGATGTGTTGTGGCATTTGGAACATGCTTATCAAGTACAGATAGCTTCACCACAAGTTGATAATAGACTCTCAAGTGCTTTTCAAAATGCAAATGAAGGTGACATAAATAATGATAACTCACATGGTATCACAAGTATTGTGCCTAATAGAATAACTTCTGGTTCTCTTGTGTTTTCTCAGATGGACAATTTTCAAGGAAGGTGA 2628 0.3847 MEEENKEVIMKHSCNFFSLFILLLLHHLFFIPFTCAYNSITTDSLTDSTFTPSVNYLIDCGSSSKTHLRDGRIFKSDPDTTSFLSTTEDIQISVDSINLANTSYSSALPLYETARVFTEDTTYSFYISKTGRLWVRLYFFPLPNPTYNLSSFVFSVHTDRLVLLHEFSQRNNDSLVFKEYLLNVTDHRFSLKFKPRKSSFAFINAIEIVSAPDILISDSAIQVSPSLGKFSGLMNSALQVSYRINVGGPPITPENDTLSRTWESDDPYNVFPQGSMSVSIPSKRIKYPQTSDFIVTPLIAPNSVYATCVQMEDPEVMQPNFNLSWMVNVEEKYSYLVRLHFCDIVSRGLDQLYFNVYINGIEGVPALDLSYETKALSTAYYKDFVIGPSNITNGSIVIQVGPTNHKQDISNAILNGFEVMKMSNSADSLDGFFSVDGEYKGPNLTTKLKKLVAIIGFFLAVISLLLLGVMYVRWLKRPLCWEESRDFFSWLFPLRSKCNMSCSIYSNKYESPKSKHGGGHSIHHSPRRGSKRFFHFIELQRATNNFDEKKVLGVGGFGKVYLGTLDDGRRVAIKRGSGSSGQGMNEFITELNMLSKLRHRHLVSLVGFCDENSEMVLVYDYVSNGPFRSHLYGSNYSPLSWEKRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENYVAKVADFGLSKTIHDKAQISTAVKGSFGYLDPEYFKSQQLTQKSDIYSFGVVLFEVLCARPVICPTLPMEQANLADWVVKQHKLGILHKAVDPRISYNMNPESYKIFVQLGVKCLSESGVDRPSMGDVLWHLEHAYQVQIASPQVDNRLSSAFQNANEGDINNDNSHGITSIVPNRITSGSLVFSQMDNFQGR 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01898 875 FunFam Receptor-like protein kinase FERONIA 237 424 - -
Vivi1g01898 875 Gene3D - 237 424 - -
Vivi1g01898 875 Gene3D - 51 212 - -
Vivi1g01898 875 Pfam Protein tyrosine and serine/threonine kinase 549 757 IPR001245 GO:0004672|GO:0006468
Vivi1g01898 875 FunFam receptor-like protein kinase FERONIA 509 621 - -
Vivi1g01898 875 CDD STKc_IRAK 552 815 - -
Vivi1g01898 875 SUPERFAMILY Protein kinase-like (PK-like) 530 815 IPR011009 -
Vivi1g01898 875 ProSiteProfiles Protein kinase domain profile. 546 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01898 875 Gene3D Phosphorylase Kinase; domain 1 512 621 - -
Vivi1g01898 875 Gene3D Transferase(Phosphotransferase) domain 1 622 838 - -
Vivi1g01898 875 SMART serkin_6 546 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01898 875 ProSitePatterns Protein kinases ATP-binding region signature. 552 574 IPR017441 GO:0005524
Vivi1g01898 875 FunFam Putative receptor-like protein kinase 55 212 - -
Vivi1g01898 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Vivi1g01898 875 PANTHER OS07G0166700 PROTEIN 532 821 IPR045272 GO:0004714|GO:0006468
Vivi1g01898 875 FunFam Receptor-like protein kinase FERONIA 622 836 - -
Vivi1g01898 875 Pfam Malectin-like domain 58 422 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01898 Vivi-Chr1 40257668 40260894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01898 46 828 Receptor kinase-like Gene Family AT5G61350 58.198 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi1g01898 Malectin_like 1.8e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01898 - - gmx:100814982 1102.81