Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01762 ATGGCAATGGAGATCACTGCTATGGCTTCGCCATCAACAAGACCCTCTCTTCCATCTCCTTCCACCTTCACCAAGCCTCAACACAGACGCCTCCACAACATATCATTACCAACCTCAACCACCATTTCACTACTCGCTCTTTTCACCCCTCCAAATGAAGCCAGAGCTGCTGTTAATATCTCCAAGGACCAAATTGTTTCTTCTATTACCCAAGTGGAGCAGACTATTGATCAGGTTCAGGTGGTAGGTTCTGGTTTTTTGGACACAGCACAGCGTGTTGCTGGAGCTATTGGGAATGCTTTGAAGCCTGGCTTCGATACGGCGTTGCCAATTGTGCAGCAGGCTGGTGAAGAGGCTCTGAAAATTGCTTCACCAGCTTTCTCTGAGGCTTCTAGGAAGGCTCAAGAAGCACTTCAAAGCTCTGGTGTTGATACTCAACCTGTTCTTACTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACAACCAAAGTGATTGAAGGTGCCAAGCCAATAGCCTCATCAACCATGGACACTATAACTTCTTCAGATCCCACTGTGATTGCTGGAACAGCTGGAGCACTATTTGTTGCATATCTCTTGTTTCCTCCTATCTGGTCTGTCATCTCCTTCGGTCTTCGCGGTTACAAAGGAGACTTGACACCAGCTCAAACACTTGATATGTTATGCACACAAAACTATATTTTGATTGATGTAAGGGCGGAGAAAGATAAGGACAAGGCCGGTATCCCCCGCCTTCCGTCTAGTGCTAAAAACAAGATGGTTGCCATTCCATTGGAAGAAGTTCCAAGCAAGATAAAAGGACTAGTGAGGAATGTGAAGAGAGTGGAAGCTGAAATTGCAGCATTAAAGATTTCATATCTGAAGAAAATCAACAAAGGCTCCAACATTGTGATCTTGGACTCGTACTCGGACTCTGCAAAGATAGTTGCAAGAACGCTAACGAGGCTTGGATTTAAGAACTCATGGATCGTTGGTGATGGATTTTCTGGAGGCAAAGGGTGGTTACAGAGTAGATTAGGAACGGATTCGTATAAATTTTCGTTTGCAGAGGTGTTGTCGCCATCTAGAATCATCCCTGCAGGTGTTAAAAGTTTTGGAACAACCAGCAGGCAATCTAGTCAGAAACTTCTTCCAGGAGCTGACTGA 1170 0.453 MAMEITAMASPSTRPSLPSPSTFTKPQHRRLHNISLPTSTTISLLALFTPPNEARAAVNISKDQIVSSITQVEQTIDQVQVVGSGFLDTAQRVAGAIGNALKPGFDTALPIVQQAGEEALKIASPAFSEASRKAQEALQSSGVDTQPVLTAAKTVADAAQQTTKVIEGAKPIASSTMDTITSSDPTVIAGTAGALFVAYLLFPPIWSVISFGLRGYKGDLTPAQTLDMLCTQNYILIDVRAEKDKDKAGIPRLPSSAKNKMVAIPLEEVPSKIKGLVRNVKRVEAEIAALKISYLKKINKGSNIVILDSYSDSAKIVARTLTRLGFKNSWIVGDGFSGGKGWLQSRLGTDSYKFSFAEVLSPSRIIPAGVKSFGTTSRQSSQKLLPGAD 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01762 389 MobiDBLite consensus disorder prediction 1 26 - -
Vivi1g01762 389 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 23 351 IPR044690 GO:0009704|GO:0071277|GO:0090333
Vivi1g01762 389 CDD RHOD 224 338 - -
Vivi1g01762 389 Pfam Rhodanese-like domain 222 338 IPR001763 -
Vivi1g01762 389 Coils Coil 273 293 - -
Vivi1g01762 389 MobiDBLite consensus disorder prediction 9 26 - -
Vivi1g01762 389 ProSiteProfiles Rhodanese domain profile. 230 351 IPR001763 -
Vivi1g01762 389 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 197 338 IPR036873 -
Vivi1g01762 389 Gene3D - 217 356 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01762 Vivi-Chr1 37955745 37958461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01762 1 309 Sulfurtransferasese or Rhodanese AT5G23060 68.810 9.73e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01762 - - gmx:100813363 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01762 1 37955745 37958461 Vivi1g01762 1 37955745 37958461 ECH