Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01753 ATGGCTGGTGGAAGGAGAAGGAGGCATCATTTCAGCAAGATCCATGCATTTTCATGCGGTAAAGCATCGTTGGAACAAGATGAACATTCACTCATAGGAGGACCTGGTTTCTCAAGGAAAGTTTATTGCAATGATGCAGAACGTGCTATGTCTAGTATCTATAATTACGGTGATAATTACGTTAGGACTACTAAGTACACATTAGCAACTTTTCTACCTAAATCTTTGTTCGAACAATTCAGAAGAGTTGCGAATTTCTACTTCCTGGTTGTTGCTATTCTGTCTTTCTCTCCTGTTGCTCCTTATTCTGCTGTCAGCAATGTTATTCCTCTTCTTGTTGTTGTTGCTGCTACTATGGCCAAAGAGTTCATTGAAGATTTTCAGCGGAAAAAACAGGATATAGAGATGAATAACAGAAAAGTGAAGGTTCATGGTGGTGATGGTGTTTTTGATTATTGTAAATGGAGAGATTTGAGAGTTGGAGATATAGTGAAAGTTGAAAAGGATGAGTATTTTCCTGCTGATCTTATACTTCTTGCGTCGAATTACGATGACGCGATTTGCTATGTCGATACGATGAATCTCGATGGAGAGACAAATCTTAAACTAAAGCAAGCACTAGAAGGGACTTCAAATTTGTTAGAAGACTCGAGTTTTCGAGATTTCAAGGCTGTGATTCGATGCGAGGATCCGAATGCGAATTTGTATACTTTTGTAGGAAGTTTGGAGGCTGATGAGGAACATCAGTATCCACTTTCACCTCAGCAGTTACTTCTTAGAGACTCTAAGTTGAAGAACACTGATTTTATCTATGGTGTTGTGATTTTCACCGGGCACGATACGAAGGTTATGCAGAATTCGACGGAGCCTCCTTCGAAGAGAAGTAAGATTGAGAAGAGAATGGATAAGGTTATCTACTGTTTGTTCTTTGTGCTGATTTTGGTTTCGTTCATCGGTTCGATTTTCTTCGGGATTTGGACGAAGCAGGATATTAAGAACGGAAGAATGAAGAGATGGTACCTTAGGCCTGATGATACTGAGGTTTACTATGATCCTGATAATGCAGTAGTTGCGGCGCTTCTTCATTTCTTGACAGCATTGATGTTGTACGGGTACTTTATTCCGATTTCGTTGTATGTTTCGATTGAAGTTGTGAAGGTTCTTCAAAGCGTTTTCATCAACCAGGATTTGAACATGTATTACGAGGAAACGGATAAGCCAGCGCACGCTCGTACGTCGAATTTGAACGAAGAACTTGGTCAAGTTGATACCATACTTTCTGATAAAACAGGAACATTGACTTGTAACTCTATGGAGTTTATCAAGTGTTCTATTGGTGGAGTTGCTTATGGAAAAGGATTTACGGAAGTCGAGAGAGCTTTATCGAAGAGAAAAGATTCGTATTTCGGCCGCAAGTTGAAAGAGGAAAATGCTACTAAGGCTGTGAAATCGAAGTCGAAGATTAAAGGGTTTAACTTCATGGATGAAAGGATCATGAATGGAAATTGGGTGAAACAGTCTAATGCTAATGTGATACAGAATTTCCTAAAGGTTTTGGCTGTATGTCATACTGCAATACCTGAAGTTGATGAAGCAACCGGTAGCATTTCGTACGAAGCTGAATCGCCGGACGAGGCTGCTTTTGTTGTTGCAGCCAGCCAATTCGGATTCGAATTTTACGAAAGAACAAATGCAGCTATTTCAGTTCATGAATTGGACCTTGAATCAAATGTGAAATCAGAAAGGTCTTATAACCTTTTGAATGTATTAGAGTTTACGAGTGCACGAAAGCGGATGTCCGTAATCGTAAGAGACCACACTGGAAAACTACTACTACTTAGCAAAGGTGCTGACAGTGTCATGTTTGAACTACTTGGAAAGAATGGAAGGGAGTTTGAAGAGCAGACTAAGTATCACATTAACGAATACGCCGATTCTGGTTTAAGGACATTGATACTCGCCTATCGTGAACTCGACGAGGAAGAGTACAATCAATTTAATAAAGAGTTGACAGATGCAAAAAACTTAGTGAGTGCAGATCAGGAACAGATTGTAGAGGATGTATTGCAAAAAATTGAGAAGGATTTGATTCTTCTCGGTGCTACCGCAGTCGAGGATAAACTACAAGACGGGGTTCCTGAATGTATTGACAAACTAGCACAGGCTGGGATTAAGTTATGGGTTTTGACAGGCGATAAAATGGAAACAGCAATTAATATCGGATATGCTTGTAGTTTGCTTAGACAAGGAATGAAACAGATTATAATTAATTCAGATACTCCTGAAAACAAATTGCTCGAGAAAATGGAGGACAAATCGGCTTCTGAAGCGGCAATTAAGGCAAGTGTTGTTCGTCAAATAACAGAGGCAAAGGCGTTATTATCTTCGTCAGACAATAACTCTGAGGCGTTAGCTCTGATCATTGACGGAAAGTCTCTTGCTTATGCGTTAGAAGACGATGTAAAGAACTTGTTTCTTGAACTTGCGATTGGCTGTGCGTCTGTTATATGCTGTCGTTCGTCTCCGAAGCAAAAAGCACTTGTTACTAGATTGGTTAAAATGAGACCTGGTAGCACAACTCTAGCTATTGGAGATGGAGCAAATGATGTTGGTATGCTACAAGAAGCAGATATTGGAATCGGTATCAGTGGTGTCGAAGGAATGCAGGCAGTTATGTCAAGTGATATCGCCATCGCTCAATTTCGATTCCTAGAACGCTTACTTCTCGTGCACGGACATTGGTGTTACAGAAGAATTTCATCTATGATTTGTTACTTCTTCTACAAGAATATCACTTTCGGCTTCACTTTGTTCTTCTACGAGATGTATACCTCATTCTCAGGCCAAGCTGCATACAATGATTGGTTCATGTCATTTTACAATGTATTCTTCACTTCACTTCCTGTTATTGCTTTAGGAGTATTTGATCAAGATGTTTCCTCCAAATTATGTCTCAAGTTTCCATTACTCTACCAAGAAGGTGTACAAAACTTACTATTCAGCTGGAAAAGAATCTCCGGTTGGGCCTTAAACGGAGTTGCAAGTTCCGCGATTATATTCTTCTTCTGCATCCGCGCATTCGAGCACCAATCCTTTCGCAAAGGAGGCGAACTTGCTGACTTACAAATCCTCGGAACCACATTGTACACATGTGTTGTATGGGTTGTGAACTGCCAAATGGCATTATCAATAACCTACTTCACATACATTCAACATATTTTCATATGGGGAAGCATTTTCATGTGGTACATTTTCCTCATGGCATATGGAGCTATAGAGCCTTCAATATCCACAACTGCCTATAACGTCTTCATTGAAGCATGTGCACCCTCACTATCTTATTGGGTTGTTACTTTTCTTGTTCTTTTTGCTGCATTGCTTCCGTATTTCGCGTACTCGACTATTCAACTTCGGTTCTTCCCGGTGTATCATCAGATGATACAATGGATAAGAAAAGACGGGCAGGTGAATGATCCTGAGTTTTGCGACGTGGTGAGACAAAGGTCGATAAGACATACGACGGTTGGATTTACCGCTCGTTTGGAAGCTTCTAGACGGTTTGAAGCTTCTAGAAGATCGGAAATATCTTTGGTACCATTAGATGGGAAATTCGGAGAAAATCAATAA 3627 0.4017 MAGGRRRRHHFSKIHAFSCGKASLEQDEHSLIGGPGFSRKVYCNDAERAMSSIYNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVVAILSFSPVAPYSAVSNVIPLLVVVAATMAKEFIEDFQRKKQDIEMNNRKVKVHGGDGVFDYCKWRDLRVGDIVKVEKDEYFPADLILLASNYDDAICYVDTMNLDGETNLKLKQALEGTSNLLEDSSFRDFKAVIRCEDPNANLYTFVGSLEADEEHQYPLSPQQLLLRDSKLKNTDFIYGVVIFTGHDTKVMQNSTEPPSKRSKIEKRMDKVIYCLFFVLILVSFIGSIFFGIWTKQDIKNGRMKRWYLRPDDTEVYYDPDNAVVAALLHFLTALMLYGYFIPISLYVSIEVVKVLQSVFINQDLNMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIGGVAYGKGFTEVERALSKRKDSYFGRKLKEENATKAVKSKSKIKGFNFMDERIMNGNWVKQSNANVIQNFLKVLAVCHTAIPEVDEATGSISYEAESPDEAAFVVAASQFGFEFYERTNAAISVHELDLESNVKSERSYNLLNVLEFTSARKRMSVIVRDHTGKLLLLSKGADSVMFELLGKNGREFEEQTKYHINEYADSGLRTLILAYRELDEEEYNQFNKELTDAKNLVSADQEQIVEDVLQKIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGYACSLLRQGMKQIIINSDTPENKLLEKMEDKSASEAAIKASVVRQITEAKALLSSSDNNSEALALIIDGKSLAYALEDDVKNLFLELAIGCASVICCRSSPKQKALVTRLVKMRPGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFYEMYTSFSGQAAYNDWFMSFYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGVQNLLFSWKRISGWALNGVASSAIIFFFCIRAFEHQSFRKGGELADLQILGTTLYTCVVWVVNCQMALSITYFTYIQHIFIWGSIFMWYIFLMAYGAIEPSISTTAYNVFIEACAPSLSYWVVTFLVLFAALLPYFAYSTIQLRFFPVYHQMIQWIRKDGQVNDPEFCDVVRQRSIRHTTVGFTARLEASRRFEASRRSEISLVPLDGKFGENQ 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01753 1208 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Vivi1g01753 1208 Pfam E1-E2 ATPase 136 342 - -
Vivi1g01753 1208 Coils Coil 656 676 - -
Vivi1g01753 1208 FunFam Phospholipid-transporting ATPase 117 288 - -
Vivi1g01753 1208 Pfam Cation transport ATPase (P-type) 537 623 - -
Vivi1g01753 1208 SUPERFAMILY Calcium ATPase, transduction domain A 145 286 IPR008250 -
Vivi1g01753 1208 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 700 IPR023299 GO:0000166
Vivi1g01753 1208 SFLD Haloacid Dehalogenase 408 914 - -
Vivi1g01753 1208 FunFam Phospholipid-transporting ATPase 699 903 - -
Vivi1g01753 1208 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Vivi1g01753 1208 NCBIfam phospholipid-translocating P-type ATPase 56 1148 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vivi1g01753 1208 FunFam Phospholipid-transporting ATPase 541 699 - -
Vivi1g01753 1208 Gene3D - 115 288 - -
Vivi1g01753 1208 SUPERFAMILY HAD-like 421 918 IPR036412 -
Vivi1g01753 1208 Gene3D - 695 903 IPR023214 -
Vivi1g01753 1208 SFLD p-type atpase 408 914 IPR044492 -
Vivi1g01753 1208 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 1141 IPR023298 -
Vivi1g01753 1208 Gene3D - 529 674 IPR023299 GO:0000166
Vivi1g01753 1208 Pfam Phospholipid-translocating P-type ATPase C-terminal 891 1141 IPR032630 -
Vivi1g01753 1208 CDD P-type_ATPase_APLT_Dnf-like 58 1023 - -
Vivi1g01753 1208 NCBIfam HAD-IC family P-type ATPase 829 946 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi1g01753 1208 PRINTS P-type cation-transporting ATPase superfamily signature 749 759 - -
Vivi1g01753 1208 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Vivi1g01753 1208 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Vivi1g01753 1208 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 31 1154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01753 Vivi-Chr1 37799684 37804535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01753 10 1195 Primary Pumps ATPases AT3G25610 69.050 0.0 1732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01753 K01530 - gmx:100799312 2008.03