Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01744 ATGGCTTCCATTTTCAATGCCTCAAACTCACTTTTCCTTTGCTTGATTCTTGTTTCTATCTCACAATTTTTGGTTATCAATTGTACTGAATTTCGAGTTGGAGGTAGAAATGGTTGGGTTGTCCCTACCTCAAAGGACTCCGATGAAATGTATAACCAATGGGCTTCCCAAAATCGGTTCAAAATCGACGATACTATTCATTTCAAGTACGATAAGGACTCAGTGATGATGGTGAGTGAAGGGGAATACGAAAAGTGCAAATCGGATCGTCCGCTGTTTTTCGAAAACAATGGGAATACCACTTACAAATTTGAACGACCGGGAATGTTCTACTTCATTAGTGGTGTTAGTGGACATTGTACAAGGGGACAGAAAATGGTGATCAAGGTTTTGGATATTGAACCAATTATAGCACAATCACCACAATCTGCAAATGAGACTGCATCAATAGCACACTCTAAAGCTACTCAAATGGATGCTATTAGTGTCACAGTATTCACACTCTTTGTTCTTTCATTCATTGGCATGGTTTATGTTTGA 540 0.3889 MASIFNASNSLFLCLILVSISQFLVINCTEFRVGGRNGWVVPTSKDSDEMYNQWASQNRFKIDDTIHFKYDKDSVMMVSEGEYEKCKSDRPLFFENNGNTTYKFERPGMFYFISGVSGHCTRGQKMVIKVLDIEPIIAQSPQSANETASIAHSKATQMDAISVTVFTLFVLSFIGMVYV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01744 179 Pfam Plastocyanin-like domain 44 124 IPR003245 GO:0009055
Vivi1g01744 179 Gene3D - 28 134 IPR008972 -
Vivi1g01744 179 CDD OsENODL1_like 29 131 IPR041846 -
Vivi1g01744 179 ProSiteProfiles Phytocyanin domain profile. 29 132 IPR003245 GO:0009055
Vivi1g01744 179 FunFam Early nodulin-like protein 1 28 134 - -
Vivi1g01744 179 SUPERFAMILY Cupredoxins 28 131 IPR008972 -
Vivi1g01744 179 PANTHER BLUE COPPER PROTEIN 29 149 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01744 Vivi-Chr1 37662168 37663052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01744 10 134 Phytocyanin Superfamily AT1G48940 52.800 2.02e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01744 - - vvo:131604415 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01744 1 37662168 37663052 Vivi1g01744 1 37662168 37663052 ECH