Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01704 ATGTGGAACTCGGCGGAGAACGCGTTCGCCAGATCGGAGTCGTTTAGGGAGGGAGGAGAAGACGAGGAAGCGTTACGCTGGGCGGCGTTGGAGAGGTTGCCGACGTACAAGCGAGCGCGGAGAGGAATCTTCCAGAATCTCGTCGGTGATAAGAAAGAGATCGATGTGAGTGAATTACAGACGCCGGAGCAGAAGCTTATTTTGGAAAGGCTTGTTGATTTCGTTGATAATGATCCTGAGAGATTCTTCCACCGTATGAGAAGCCGATTTGATGCAGTTCATTTGGAGTTTCCGAAGATTGAAGTTCGATTTCAAAACTTAACCATTGAGACTTTTGTACATGTGGGAAGCAGAGCTCTGCCTACAATTCCAAATTTCATCTGTAATATGACTGAGACTCTTTTAAGACAGTTGCGGTTATACAGAAGAAAGAGAAGCAAATTGACAATTCTTTCTGATATCAGTGGGATTATTAGACCTTCAAGGCTAACATTGTTATTGGGTCCGCCAAGCTCTGGAAAAACAACATTGCTTTTAGCTCTTGCTGGCAGATTAGGACCTGGTTTGCAGATGTCAGGGGACATTACCTACAATGGACATGGTCTGAAGGAGTTTGTTCCTCAGAGAACAGCAGCTTATGTCAGCCAACAAGATTGGCATGTAGCAGAGATGACCGTGAGGGAAACTCTCCAGTTTGCTGGTTGCTGTCAAGGAGCTGGATTTAAATACGATATGTTGATGGAACTTGCTAGAAGAGAGAAGAATTCTGGAATAAAACCCGATGAAGATCTTGATTTATTCATGAAGTCATTAGCTCTCGGTGGACAGGAAACAAATCTTGTGGTTGAGTACATCATGAAGATATTAGGTTTGGACATGTGCGGTGACACATTGGTGGGGGATGAAATGCTCAAAGGAATATCGGGAGGACAGAAGAAGCGGCTTACAACAGGCGAATTACTAGTTGGACCTGCAAGAGTGCTATTTATGGATGAGATATCAACTGGTCTAGATAGTTCAACTACATATCAGATCATCAGATATCTCAAGCATTCAACACGGGCACTTGATGCAACCACAATCATATCACTTCTTCAACCAGCTCCTGAGACCTATGAGTTGTTTGATGATGTTATTCTTTTGTCCGAGGGTCAGATTGTTTATCAGGGGCCCCGTGAGGCTGCTATTGAATTTTTCAAACTGATGGGATTCAGTTGTCCTGAGCGAAAAAATGTAGCAGACTTTTTACAAGAAGTCACGTCTAAGAAGGACCAAGAGCAATACTGGTCCGTTCTCGACCGCCCTTACCGGTACACACCTGCTGGGAAATTTGCCCAAGCATTTTCCTTGTATCGTGAGGGAAAGCTTTTGTCTGAGGAACTAAATATTCCTTTCAATAAGCGCTATAATCATCCAGCCGCCTTGGCAACTTGTTCCTATGGAGCAAAAAGGCTTGAACTTCTCAAGATTAATTATCAGTGGCAGAAGCTTCTCATAAAACGAAATGCATTTATTTACATTTTTAAATTTGTTCAGCTGATCTTGGTTGCTTTAATTACAATGAGTGTTTTTTTCCGAACAACGATGCACCATGATACAATTGATGATGGGGGCTTATATCTTGGAGCACTGTATTTTTCTATGATTACTATTCTTTTCAATGGTTTTACGGAAGTGTCAATGTTAGTTGCAAAGCTTCCAACTCTTTACAAGCATAGAGACTTGCATTTCTATCCTAGCTGGGCATATACCCTCCCTTCTTGGTTCCTTAGTATCCCAACTTCTCTCATGGAGGCTGGATGCTGGGTATTGGTATCATACTATTCAAGTGGATATGATCCTGCATTTACTAGATTTCTTCAGCAATTCTTGCTTTTTTTCTTTCTGCACCAGATGTCTATAGGCCTGTTTCGCTTGATAGGATCCTTGGGTCGGAATATGATAGTGGCCAATACCTTCGGATCATTTGCTATGTTGGTTGTAATGGCTCTTGGTGGATATATAATTTCAAAAGACCGTATACCAAGTTGGTGGATATGGGGCTTTTGGGTTTCCCCTTTGATGTATGCACAGAATTCTGCTTCTGTAAATGAGTTCCTTGGACATTCCTGGGATAAGAAAGTTGGAAACCTGACCACTTATCCATTGGGCGAGGCAGTGTTAAAAGCGAGGAGTTTGTTTACTGAGAGCTATTGGTATTGGATTGGTGTTGGAGCATTAGTCGGATACACAATTTTGTTCAACTTTCTATTCACAATCTTCTTAGCTTACCTTAATCCTTTGGGAAGACAACAAGCTGTAGTTTCAAAAGGTGAGCTGCAAGAAAGAGAAAAGAGAAGAAACGGTGAAAGCGTTGTTGTTGAGCTGAGAGAGTACTTGCAGCATTCGGCATCAAATGGAAAGCATTTTAAGCAAAGAGGAATGGTTCTCCCATTTCAACCTCTTTCCATGGCTTTCAGCAATATCAATTACTATGTGGAAGTCCCTTTGGAGTTGAAACAACAAGGGGTATCAGAAGAAAGACTGCAGCTGCTTGTTAATGTTACTGGAGCTTTTAAGCCTGGTGTGTTGACAGCATTGGTTGGAGTAAGTGGTGCTGGGAAAACCACTTTGATGGATGTATTAGCTGGAAGAAAAACTGGTGGTTTCATAGAAGGGAGTGTATATATATCTGGTTATCCTAAAAGACAAGATTCTTTTGCAAGAATTTCAGGTTACTGTGAGCAGTCTGATGTGCATTCCCCTGGCTTGACAGTTTGGGAATCCTTACTCTTTTCTGCTTGGCTTCGATTATCTTCAGATGTTGACTTGGAGACACAAAAGGCCTTTGTCGAGGAAATAATGGAGCTTGTGGAGCTCACTCCACTAAGAGGAGCACTAGTAGGTCTACCTGGAGTAGATGGTCTGTCAACAGAACAGCGAAAAAGGTTAACTATAGCAGTGGAACTAGTTGCCAACCCTTCTATAGTCTTCATGGATGAGCCCACATCCGGATTGGATGCCAGGGCTGCAGCCATTGTGATGAGAACTGTGAGGAATATAGTAAATACTGGGCGAACGATTGTTTGCACCATCCATCAGCCTAGCATAGACATATTTGAATCATTTGATGAGCTTCTGTTTATGAAGCGGGGAGGAGAGCTTATATATGCAGGTCCACTTGGCCCTAAATCTAGTGAACTAGTCAGTTATTTTGAGGCAATCGAAGGAGTTCAAAAGATCAGATCTGGATATAATCCTGCGACATGGATGCTGGAGGTTACTTCTTCAGTAGAAGAAAACCGTCTTGGAGTGGACTTTGCAGAAATCTACCGTAAATCAAGTTTATATCAATATAACCAAGAGTTGGTCGAAAGATTGAGCATACCAACCAGTAACTCAAAAGAATTGCATTTTCCAACCAAGTATTGTCGGTCACCTTTTGAGCAGTTCCTAACATGTCTTTGGAAGCAAAATCTATCTTACTGGCGTAACCCACAGTACACTGCTGTTCGCTTCTTTTACACTATCTTCATCTCGTTGATGCTTGGGACGATATGTTGGAGATTTGGTGCAACAAGGGAGACACAGCTAGATCTATTTAATGCCATGGGATCTATGTATTCAGCAATCCTCTTCATTGGCATCACAAATGGAACAGCTGTTCAACCAGTTGTTTCCGTGGAAAGATTTGTTTCGTATAGAGAAAGAGCTGCAGGGATGTACTCGGCTTTAAGTTTTGCATTTGCTCAGGTTGTGATCGAGTTTCCTTACGTGTTCGCACAGGCTATCATATACTCTTCAATATTCTATTCCATGGGTTCCTTTGTCTGGACCTTCGATAGGTTCATTTGGTACTTATTCTTCATGTATTTTACTATGTTATATTTTACCTTCTATGGGATGATGACTACTGCTGTCACACCAAATCATCACGTTGCTGCCATCATTGGTGCTCCATGTTATATGTTGTGGAACCTTTTCAGTGGTTTTATGATTCCTCATAAGAGAATCCCTATTTGGTGGAGATGGTATTACTGGGCAAACCCTGTAGCCTGGACTTTGTATGGTCTCCTAACTTCACAGTATGGTGGTGATGATAAGTTGGTGAAGCTAACTGATGGACAATCGGTACCCATAAAACTAGTACTCAGAGAAGTGTTTGGGTACAGACATGATTTCCTATGCGTTGCTGCTACAATGGTAGCTGGTTTCTGCATTCTTTTTGCATTCGTGTTCGCGTATGCAATTAAATCCTTCAACTTCCAAAGGAGATGA 4257 0.4198 MWNSAENAFARSESFREGGEDEEALRWAALERLPTYKRARRGIFQNLVGDKKEIDVSELQTPEQKLILERLVDFVDNDPERFFHRMRSRFDAVHLEFPKIEVRFQNLTIETFVHVGSRALPTIPNFICNMTETLLRQLRLYRRKRSKLTILSDISGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGPGLQMSGDITYNGHGLKEFVPQRTAAYVSQQDWHVAEMTVRETLQFAGCCQGAGFKYDMLMELARREKNSGIKPDEDLDLFMKSLALGGQETNLVVEYIMKILGLDMCGDTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISTGLDSSTTYQIIRYLKHSTRALDATTIISLLQPAPETYELFDDVILLSEGQIVYQGPREAAIEFFKLMGFSCPERKNVADFLQEVTSKKDQEQYWSVLDRPYRYTPAGKFAQAFSLYREGKLLSEELNIPFNKRYNHPAALATCSYGAKRLELLKINYQWQKLLIKRNAFIYIFKFVQLILVALITMSVFFRTTMHHDTIDDGGLYLGALYFSMITILFNGFTEVSMLVAKLPTLYKHRDLHFYPSWAYTLPSWFLSIPTSLMEAGCWVLVSYYSSGYDPAFTRFLQQFLLFFFLHQMSIGLFRLIGSLGRNMIVANTFGSFAMLVVMALGGYIISKDRIPSWWIWGFWVSPLMYAQNSASVNEFLGHSWDKKVGNLTTYPLGEAVLKARSLFTESYWYWIGVGALVGYTILFNFLFTIFLAYLNPLGRQQAVVSKGELQEREKRRNGESVVVELREYLQHSASNGKHFKQRGMVLPFQPLSMAFSNINYYVEVPLELKQQGVSEERLQLLVNVTGAFKPGVLTALVGVSGAGKTTLMDVLAGRKTGGFIEGSVYISGYPKRQDSFARISGYCEQSDVHSPGLTVWESLLFSAWLRLSSDVDLETQKAFVEEIMELVELTPLRGALVGLPGVDGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGPKSSELVSYFEAIEGVQKIRSGYNPATWMLEVTSSVEENRLGVDFAEIYRKSSLYQYNQELVERLSIPTSNSKELHFPTKYCRSPFEQFLTCLWKQNLSYWRNPQYTAVRFFYTIFISLMLGTICWRFGATRETQLDLFNAMGSMYSAILFIGITNGTAVQPVVSVERFVSYRERAAGMYSALSFAFAQVVIEFPYVFAQAIIYSSIFYSMGSFVWTFDRFIWYLFFMYFTMLYFTFYGMMTTAVTPNHHVAAIIGAPCYMLWNLFSGFMIPHKRIPIWWRWYYWANPVAWTLYGLLTSQYGGDDKLVKLTDGQSVPIKLVLREVFGYRHDFLCVAATMVAGFCILFAFVFAYAIKSFNFQRR 1418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01704 1418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 408 IPR027417 -
Vivi1g01704 1418 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 817 1070 IPR003439 GO:0005524
Vivi1g01704 1418 FunFam ABC transporter G family member 34 138 441 - -
Vivi1g01704 1418 Gene3D - 829 1061 IPR027417 -
Vivi1g01704 1418 Pfam Plant PDR ABC transporter associated 704 768 IPR013581 -
Vivi1g01704 1418 Pfam ABC transporter 151 333 IPR003439 GO:0005524
Vivi1g01704 1418 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 135 408 IPR003439 GO:0005524
Vivi1g01704 1418 SMART AAA_5 160 385 IPR003593 GO:0016887
Vivi1g01704 1418 SMART AAA_5 854 1046 IPR003593 GO:0016887
Vivi1g01704 1418 Pfam ABC transporter 846 997 IPR003439 GO:0005524
Vivi1g01704 1418 CDD ABCG_PDR_domain2 814 1052 IPR034003 -
Vivi1g01704 1418 Pfam ABC-2 type transporter 366 419 IPR043926 GO:0140359
Vivi1g01704 1418 Pfam ABC-transporter N-terminal 76 126 IPR029481 -
Vivi1g01704 1418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 830 1053 IPR027417 -
Vivi1g01704 1418 Pfam ABC-2 type transporter 490 699 IPR013525 GO:0016020|GO:0140359
Vivi1g01704 1418 Pfam ABC-2 type transporter 1142 1355 IPR013525 GO:0016020|GO:0140359
Vivi1g01704 1418 Gene3D - 135 434 IPR027417 -
Vivi1g01704 1418 FunFam ABC transporter G family member 34 831 1063 - -
Vivi1g01704 1418 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 4 1418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01704 Vivi-Chr1 36776664 36787058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01704 838 1029 Calmodulin-binding Proteins AT2G36910 26.108 9.91e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01704 K08711 - gmx:100815410 2578.9