Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01701 ATGGCTTCGGTTATTTTTATTATTCTTCATTTATTTCTGCAGCTGAGTTGTTTCCGAGTTAGTAACTCGGAGCCGACTCAGGACAAGCAAGCTCTCCTTGCTTTTATTTCACAAACACCACACTCTAACCGTGTTCAATGGAACGCTTCGGATTCCGTTTGTAACTGGGTCGGTGTTCAATGCGACGCTTCAAGTTCCTATGTTTATTCACTCCGTTTACCCGCCGTTGGTCTTGTGGGTCGGGTCCCGTCGAACACTATCGGAAGGCTAACGAATCTACGTATTCTCAGTCTCCGTTCTAATGGTCTTTCCGGCGAGATCCCTTCCGATTTCTCTAATTTGACTTTTCTTCGTAGTGTATATCTTCAAAAGAATAAATTCTCCGGTGGGTTTCCGTCTAGTTTAACTCGGTTAACTCGTTTGACTCGCTTGGATCTCTCTTCCAACAACTTTTCCGGCTCAATTCCTTTCTCCATCAACAACTTGACTCATCTCAGTGGTTTGTTCTTGGAGAATAACACGTTCTCCGGTAGTCTTCCGAGCATTACTGCGAATTTGAACGGCTTTGATGTTTCTAATAACAACCTCAACGGTTCTATCCCCAAGACGCTGTCGAAATTCCCGGAATCTTCTTTTGCCGGAAACATTAATCTCTGTGGTCCACCATTGAAGTCGTGTAGCCCGTTTTTTCCAGCGCCGGCGCCGTCACCGGGTTTAATTCCGCCGGTGATTAAACCGGGGAAGAAATCTAAGAAGCTTTCCACAGGCGCCATTGTTGCAATTGTAGTAGGTTCTGTTCTGTTCGTAGCGTTACTGCTTCTACTGTTACTATGCTGTCTCCGGAAACGTCGCCGGCAACCAGCGAAACCACCAAAGCCAGTTGTTGCCGCGGCTCGTTCCGCGCCTGCAGAAGCCGGAACATCGTCTTCCAAGGACGATATAACCGGTGGATCAGCAGAAGAAGCGAGGAACAAATTGGTGTTCTTTGACGGAGGAATATACAGTTTTGATTTGGAGGATTTGCTTAGGGCTTCTGCGGAGGTTTTGGGAAAGGGAAGCGTTGGGACTTCGTATAAAGCGGTGTTGGAAGAAGGAACTACGGTGGTTGTTAAGAGGTTGAAAGATGTTGTTGTTACAAAGAAAGAGTTTGAGATGCAAATGGAGATTCTGGGTAAAATTAAGCATGAGAATGTGGTTCCTCTTAGAGCTTTTTACTTCTCCAAAGATGAGAAATTGCTTGTGTATGATTACATGCCCGCCGGTAGCTTATCTGCTCTACTTCACGGAAGCAGAGGATCTGGGCGAACACCGTTAGATTGGGACAACCGAATGAGAATAGCCCTTGGAGCATCAAGAGGACTAGCATGCCTCCACGTGTCAGGCAAAGTAGTCCACGGCAACATTAAATCTTCCAACATCCTCCTCCGAGGACCCGACAATGACGCAGGCGTTTCGGACTTTGGTCTCAACCCGTTATTCGGAAACGGATCTCCATCAAACCGGGTAGCTGGCTACCGCGCACCCGAAACCCTAGAAACCCGAAAAGTCACATTCAAATCCGACGTATACAGCTTCGGCGTTTTGCTGTTGGAGCTATTAACAGGAAAAGCACCCAATCAAGCTTCACTAGGTGAAGAAGGAATCGATCTACCGAGGTGGGTCCAATCCGTTGTTCGCGAAGAATGGACCGCAGAGGTTTTTGATGCTGAGTTGATGAGGTTTCATAATATTGAAGAAGAGATGGTTCAGTTGTTGCAGATAGCGATGGCTTGTGTTTCTGTGGTGCCTGATCAGAGACCAAGTATGCAAGACGTGGTGCGCATGATTGAGGATATGAATCGTGGGGAGACTGATGAGGGTCTTCGTCAGTCGTCGGATGATCCTTCGAAAGGATCCGAGGGTCATACTCCACCTCAGACAAGGACTCCACCTAGATCACGCACACCGTAG 1950 0.4733 MASVIFIILHLFLQLSCFRVSNSEPTQDKQALLAFISQTPHSNRVQWNASDSVCNWVGVQCDASSSYVYSLRLPAVGLVGRVPSNTIGRLTNLRILSLRSNGLSGEIPSDFSNLTFLRSVYLQKNKFSGGFPSSLTRLTRLTRLDLSSNNFSGSIPFSINNLTHLSGLFLENNTFSGSLPSITANLNGFDVSNNNLNGSIPKTLSKFPESSFAGNINLCGPPLKSCSPFFPAPAPSPGLIPPVIKPGKKSKKLSTGAIVAIVVGSVLFVALLLLLLLCCLRKRRRQPAKPPKPVVAAARSAPAEAGTSSSKDDITGGSAEEARNKLVFFDGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEMQMEILGKIKHENVVPLRAFYFSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALGASRGLACLHVSGKVVHGNIKSSNILLRGPDNDAGVSDFGLNPLFGNGSPSNRVAGYRAPETLETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSVVPDQRPSMQDVVRMIEDMNRGETDEGLRQSSDDPSKGSEGHTPPQTRTPPRSRTP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01701 649 MobiDBLite consensus disorder prediction 611 629 - -
Vivi1g01701 649 Gene3D Phosphorylase Kinase; domain 1 311 417 - -
Vivi1g01701 649 MobiDBLite consensus disorder prediction 611 649 - -
Vivi1g01701 649 Gene3D Transferase(Phosphotransferase) domain 1 418 630 - -
Vivi1g01701 649 Pfam Protein kinase domain 346 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01701 649 SUPERFAMILY Protein kinase-like (PK-like) 347 609 IPR011009 -
Vivi1g01701 649 MobiDBLite consensus disorder prediction 290 317 - -
Vivi1g01701 649 PANTHER OS05G0588300 PROTEIN 6 622 - -
Vivi1g01701 649 ProSiteProfiles Protein kinase domain profile. 343 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01701 649 CDD STKc_IRAK 349 612 - -
Vivi1g01701 649 FunFam pollen receptor-like kinase 1 312 417 - -
Vivi1g01701 649 Gene3D Ribonuclease Inhibitor 186 227 IPR032675 -
Vivi1g01701 649 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Vivi1g01701 649 FunFam Probable inactive receptor kinase RLK902 25 183 - -
Vivi1g01701 649 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 418 623 - -
Vivi1g01701 649 SUPERFAMILY L domain-like 27 222 - -
Vivi1g01701 649 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01701 Vivi-Chr1 36672882 36676530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01701 7 630 Receptor kinase-like Gene Family AT5G58300 52.607 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi1g01701 Pkinase 9.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01701 - - gmx:100806857 983.015