Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01681 ATGTCCACTGAAGATTCCAAGCGTGTTGTTCTGTTAAAGGATTACCGCAACATTGGCATCATGGCTCACATAGACGCAGGAAAAACAACTACAACAGAAAGAATTCTCTTCTACACTGGAAGAAACTACAAAATCAGAGAGGTGCACGAGGGAACCACGACAATGGACTGGATGGAACAGGAACAAGAACGAGGGATTACGATTGCTTCTGCTGCGACCACCACGTTTTGGGATAAGCACAGGATCAATATCATTGATACTCCAGGTCATGTTGACTTCACTTTAGAAGTCGAGCATGCGCTTAGGGTGTTGGATGGGGCTATATGCTTGTTTGACAGTGTTGCTGGTGTGGAACCGCAATTGGAAACTGTGTGGAGGCAGGCTGATAGATACGGGGTCCCGAGAATTTGTTTTGTCAATAAAATGGACAGACTTGGAGCGAATTTTTACCGGACAAGAGATATGATTGCGACGAATCTAGGTGCTAAACCTCTTGTACTTCAACTACCGATTGGAGCGGAGGATACGTTTAAGGGAGTTATTGATATTGTTAGGATGAAAGTTATAGTTGGGGGTGGTGAAGAGCTTGGTGCCAAGTTTGCTTATGAAGATATACCTGAAGATCTCCTAGAGCAGGCTCAGGATTATAGATCACAGGTTATTTTCTAG 669 0.441 MSTEDSKRVVLLKDYRNIGIMAHIDAGKTTTTERILFYTGRNYKIREVHEGTTTMDWMEQEQERGITIASAATTTFWDKHRINIIDTPGHVDFTLEVEHALRVLDGAICLFDSVAGVEPQLETVWRQADRYGVPRICFVNKMDRLGANFYRTRDMIATNLGAKPLVLQLPIGAEDTFKGVIDIVRMKVIVGGGEELGAKFAYEDIPEDLLEQAQDYRSQVIF 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01681 222 CDD EF-G 17 222 - -
Vivi1g01681 222 Gene3D - 7 222 IPR027417 -
Vivi1g01681 222 PRINTS GTP-binding elongation factor signature 83 93 IPR000795 GO:0003924|GO:0005525
Vivi1g01681 222 PRINTS GTP-binding elongation factor signature 99 110 IPR000795 GO:0003924|GO:0005525
Vivi1g01681 222 PRINTS GTP-binding elongation factor signature 63 71 IPR000795 GO:0003924|GO:0005525
Vivi1g01681 222 PRINTS GTP-binding elongation factor signature 17 30 IPR000795 GO:0003924|GO:0005525
Vivi1g01681 222 PRINTS GTP-binding elongation factor signature 135 144 IPR000795 GO:0003924|GO:0005525
Vivi1g01681 222 NCBIfam small GTP-binding protein domain 15 185 IPR005225 GO:0005525
Vivi1g01681 222 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 4 221 - -
Vivi1g01681 222 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 13 222 IPR000795 GO:0003924|GO:0005525
Vivi1g01681 222 FunFam Elongation factor G 6 222 - -
Vivi1g01681 222 Pfam Elongation factor Tu GTP binding domain 14 174 IPR000795 GO:0003924|GO:0005525
Vivi1g01681 222 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 IPR031157 -
Vivi1g01681 222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 219 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01681 Vivi-Chr1 36216745 36218274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01681 13 145 Eukaryotic Initiation Factors Gene Family AT3G22980 37.594 1.25e-23 96.7