Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01665 ATGGCATTTCTTTTGCCAATGATAATTCAAGCTAAGATGCATATCCTCTTCCGCACACTTTCCAAAGGCAAAAAAGTATTGTCAGCTAATAATATACCAAAAGGATATTTAGCAGTATATGTTGGAGAAGAGAACAAGAAGAGATTTGTTGTTCCAATATCATATTTGCATCAACCTGCTTTTCAACAATTTCTTTGTAAAGCTGAAGAAGAATTTGGATTTAATCATCCAATGGGCGGTCTCACCATTCCTTGCGGAGAAGACGTCTTTGTTAATGTCACCTCTCAATTTAAAAGTTAA 300 0.35 MAFLLPMIIQAKMHILFRTLSKGKKVLSANNIPKGYLAVYVGEENKKRFVVPISYLHQPAFQQFLCKAEEEFGFNHPMGGLTIPCGEDVFVNVTSQFKS 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01665 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 25 96 IPR003676 GO:0009733
Vivi1g01665 99 Pfam Auxin responsive protein 27 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01665 Vivi-Chr1 35496590 35497439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01665 31 90 Calmodulin-binding Proteins AT3G43120 53.333 1.36e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01665 K14488 - aew:130774657 127.487