Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01664 ATGGCCACCACACCTTACAAAGACGAACCCGACTACGACAGCAGCTCCTCCTCCATCACCGTACCAGACTCCACCCGAAGCTGGATGAGTAACCTCAGCTTCGGAAGCCGCCGTCGCCGAAGCTCCGTCTCCGTCTCTTCCACCACCACATACACCTCCTCAACTCTACCTTCCAACGCTAAACCTCACAAAGCAAACCAAGTTGCATGGGAGGCCATGAGCCGACTCCGACTCAACAAAGGCCGAGTCGGACTCGACCACTTCCGACTCCTAAAACGGCTCGGAAGCGGCGACATAGGGAATGTGTATCTTTGTCAGATAAGAAACCCGGTGGTGGGTTTGCCTCAGTGCTTGTATGCCATGAAAGTCGTTGATAGAGAAGCACTTGCTATAAGAAAGAAGCTCCAGAGAGCTGAGATGGAGAAGGAGATTCTGCGTATGCTTGATCACCCTTTTTTGCCTACTTTATACACCGAGTTTGATGCTTCTCATTACTCTTGTTTGGTCATGGAGTTTTGTCCTGGTGGCGATTTATATGCTTCTCGCCAACGCCAGCCTGGGAAGCGCTTTTCCTTATCATCCTCTAAGTTTTATGCAGCTGAGACACTATTGGCTTTAGAATATCTACACATGATGGGAATAGTATACAGAGATTTAAAGCCAGAGAATGTTCTAGTAAGAGAAGATGGACACATAATGCTATCAGATTTTGATCTTTCTCTAAAATGCGACGTTGTTCCGAAGCTGTTAAGAAGCAAAACAAGGTTAGAACGTAGCATAAAATCAACTACAAAGAGAGCTTCAACACCTTCATGCATTTCACCCATGCAACCAGTTTTGTCATGTTTATTATCATCAGCAAGCAAGAAAAAGAAAACGACAGTTGAAACAGTTATAAGAGAGAATGTTCAAGAGGAGTTTGAGGTTGATCTTGATCCTGATTTTGTAGCGGAACCAATTGAAGCAAGATCGAAATCATTCGTGGGGACACATGAGTATTTAGCACCAGAAGTTATATTAGGACAAGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGTGTTTTTTTGTTTGAGATGTTATATGGAAGAACACCGTTTAAAGGTGAGAACAATGAGAAAACATTGGTAAATATTCTTAAACAAGAACTGTCTTTTCCTAGGATTACTGTTAATAGTAATTATGAGTTTGAAGAGATGGTGAAAGTTCAAGATCTTATAAGTAAACTGTTGGTGAAGAATCCAATTAAGAGAATTGGAAGCTGTTTGGGTTCTGTTGAGATTAAAAGACATGAGTTTTTTAAAGGTGTTAATTGGGCTTTGATTAGATCAGTTAAACCTCCTGAAGTTCCTAGTGATAAGAACAAGATTAGGAATAGGGTTATGGTGCCTAAATTAAGCAAGAAAGATAGAGATCAACCATTTCAACCTAATCATCGTTTTGATTACTTCTAA 1455 0.4165 MATTPYKDEPDYDSSSSSITVPDSTRSWMSNLSFGSRRRRSSVSVSSTTTYTSSTLPSNAKPHKANQVAWEAMSRLRLNKGRVGLDHFRLLKRLGSGDIGNVYLCQIRNPVVGLPQCLYAMKVVDREALAIRKKLQRAEMEKEILRMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYASRQRQPGKRFSLSSSKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRLERSIKSTTKRASTPSCISPMQPVLSCLLSSASKKKKTTVETVIRENVQEEFEVDLDPDFVAEPIEARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLFEMLYGRTPFKGENNEKTLVNILKQELSFPRITVNSNYEFEEMVKVQDLISKLLVKNPIKRIGSCLGSVEIKRHEFFKGVNWALIRSVKPPEVPSDKNKIRNRVMVPKLSKKDRDQPFQPNHRFDYF 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01664 484 CDD STKc_phototropin_like 86 451 - -
Vivi1g01664 484 MobiDBLite consensus disorder prediction 1 23 - -
Vivi1g01664 484 Gene3D Transferase(Phosphotransferase) domain 1 173 242 - -
Vivi1g01664 484 Coils Coil 121 141 - -
Vivi1g01664 484 Gene3D Transferase(Phosphotransferase) domain 1 322 452 - -
Vivi1g01664 484 Gene3D Phosphorylase Kinase; domain 1 86 172 - -
Vivi1g01664 484 MobiDBLite consensus disorder prediction 39 62 - -
Vivi1g01664 484 PANTHER FLIPPASE KINASE 1-RELATED 36 456 - -
Vivi1g01664 484 SMART serkin_6 88 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01664 484 MobiDBLite consensus disorder prediction 9 23 - -
Vivi1g01664 484 FunFam serine/threonine-protein kinase D6PK-like 322 452 - -
Vivi1g01664 484 FunFam protein kinase PINOID 173 241 - -
Vivi1g01664 484 MobiDBLite consensus disorder prediction 39 63 - -
Vivi1g01664 484 ProSiteProfiles Protein kinase domain profile. 88 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01664 484 Pfam Protein kinase domain 324 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01664 484 Pfam Protein kinase domain 89 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01664 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Vivi1g01664 484 FunFam protein kinase PINOID 2 86 172 - -
Vivi1g01664 484 SUPERFAMILY Protein kinase-like (PK-like) 69 456 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01664 Vivi-Chr1 35374365 35376169 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01664 6 484 AGC Kinase Gene Family AT2G26700 59.245 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi1g01664 Pkinase 2.6e-31 CL0016