Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01608 ATGATTGTGAAATTTTGCTTCCTGGTGATTTTGGTGATGAGTTTGACAGTTAAAGCCCAGCTGAAAACTGGTTTTTATTCAACTTCATGTCCTACAGCCGAGTCCATCGTTCGGTCCACAGTTGTATCTTACTTCAACAATGATCCAACCATTGCTCCTGCCTTGCTCAGACTTCATTTCCATGATTGCTTTGTCCAAGGCTGCGATGGATCCATATTGATTGCAGGGTTCTCCGCAGAGAGGAATTCTTTGACAAACCTTGGTCTAAGAGGTTTCGAAGTGATAGACAATGCAAAATCACAAATAGAGGCTGTATGCCCTGGAGTTGTCTCATGTGCTGACATCCTAGCATTAGCAGCTCGTGATGCTGTCGATTTGACCGATGGCCCAAGTTGGTCAGTACCAACAGGAAGGAGAGATGGAAGGACTTCTTTATCATCTCAAGCCTCAAACTTGCCTTCTCCACTTGAACCTGTTTCTGTCCACAGACAAAAATTTGCTGCCAAAGGTCTAGATGATCATGACCTTGTTACCTTACTCGGTGCACATACAATAGGCCAGACAGATTGCAGGTTCTTCAGTTATCGGATGTACAATTTCACACCAACTGGCAATGCTGATCCTTCTATAAACCAAGCTTTCTTATCCCAACTTCAAGTAATATGTCCGAAAAACGGCGATGGTTTGAGAAAGGTGGCTTTAGATAAAGATACTCCAGCCAAATTTGATGTGAGTTTCTTCAAGAATGTGCGCGATGGTAATGCGGTTCTAGAGTCAGACCAGAGGCTTTGGGAAGATTCTGCTACAAGAAGGGTGGTGCAAAATTATGGAGGGTTTATTAGAGGGTTATTGGGGTTAAGGTTTGATTATGAATTTCCAAAAGCTATGATTAAGTTGAGTAGTGTAGATGTGAAGACTGGTTATGATGGAGAGATTAGAAAAGTATGCTCAAAATTTAACTGA 963 0.4216 MIVKFCFLVILVMSLTVKAQLKTGFYSTSCPTAESIVRSTVVSYFNNDPTIAPALLRLHFHDCFVQGCDGSILIAGFSAERNSLTNLGLRGFEVIDNAKSQIEAVCPGVVSCADILALAARDAVDLTDGPSWSVPTGRRDGRTSLSSQASNLPSPLEPVSVHRQKFAAKGLDDHDLVTLLGAHTIGQTDCRFFSYRMYNFTPTGNADPSINQAFLSQLQVICPKNGDGLRKVALDKDTPAKFDVSFFKNVRDGNAVLESDQRLWEDSATRRVVQNYGGFIRGLLGLRFDYEFPKAMIKLSSVDVKTGYDGEIRKVCSKFN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01608 320 FunFam Peroxidase 24 164 - -
Vivi1g01608 320 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Haem peroxidase superfamily signature 128 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 CDD secretory_peroxidase 20 319 IPR033905 GO:0004601|GO:0042744
Vivi1g01608 320 MobiDBLite consensus disorder prediction 137 156 - -
Vivi1g01608 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Vivi1g01608 320 MobiDBLite consensus disorder prediction 129 156 - -
Vivi1g01608 320 PANTHER PEROXIDASE 25-RELATED 12 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 FunFam Peroxidase 153 299 - -
Vivi1g01608 320 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Vivi1g01608 320 Gene3D - 24 320 - -
Vivi1g01608 320 SUPERFAMILY Heme-dependent peroxidases 20 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 Pfam Peroxidase 37 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Plant peroxidase signature 128 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 ProSiteProfiles Plant heme peroxidase family profile. 20 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g01608 320 Gene3D Peroxidase, domain 2 153 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01608 Vivi-Chr1 34129449 34130916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01608 4 320 Peroxidase AT2G41480 70.186 5.47e-174 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01608 K00430 - gmx:100816487 532.332