Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01605 ATGGCCTCCACCTTTGTTCTTTTATTATTACTGTTCTTGTTCATGCTATTTACAATTGAAGCCACAAACACTAAAACTCAAAAACATGACTCCAGCAGTATCATACCGTTGGGGTCTTCACTCTCTCCTAAAGGCGAAAATAGTTCATGGTCATCAAGTTCTGGCCATTTTGCTTTCGGGTTTTACCCACAAGGCAGTGGCTTTGCGGTTGGGATATGGTTAGTTAGTCCTTCTGCAAACACAACCACTGTTGTGTGGACTGCTAACCGTGATGAACCAATAGTTTCCTCTGAATCTATGTTGAATTTCACAGAGCATGGTCTGCTTCTTCAAAATGGAAACAGAGACTCGCTTACGAATATAGACTCAGAATATTTAAAGACAGGGATAGTCTCATGGGCATCTATGCTTGATTCTGGCAACTTTGTAATTTATGATGAAGATTCGAATGTTATTTGGCAAAGCTTTGATTATCCAACAGACACCTTATTAGGAGGTCAGAATTTTACTGATTCTGTTTATTTACTCTCCAGTATTTCCTCATTTGACCATTCAAGTGGACGCTACTATCTCAAACTGCGAAGTGATGGAAAGGTTGCTGCTTACCCGATTTACAGTAGCAGAAGTTCACAGGATGTTTATTTTGAGCAACAAGGCTGTCTTTGCTCAGATGGAGGGCCTAATTATAGAATATGTTACAAAAGTAGCAATAAGCCTGGAAAGAAGACACACAGCAATACAACTTCAATCTACCGTGCAACACTTGACATTGATGGAAACCTGAGATTGTATGAGCACCAGTTTCACTTTGAGGGCTACAACAGCTATCATGTGGTAATGTTGTGGCAAGCACTTAATGATACATGTCTAGTGAAGGGGATATGTGGGTTGAACAGTTATTGCTCCTCCAACATGAGCGGTGATGCTGTCTGCAAATGTTATTCTGGTTTCATCCCATCCAAGACTAAAAGCAGTCCTAACATGCCTATAGACTGCGTACAGATGAATAACAGAGATAATTGTGAAAGCAGTGAAGGACCAATGTTGTTATATAACTTTACTCGCTACAAGAATATTTCTTGGAGCGATTTTCCTTATTCTATTATTCCCATGATGAAGGTGGAAACTTGTGAGAAGGCTTGCCAACAAGATTGTGTTTGCGGGGGAGCAATCTATGTATATACAGACGGCAGTTGCAATAAATATAGGCTTCCACTTAAATATGGCAGGGTTCAAAATGATTCTTCCAATGTATCTATGGCCCTATTAAAAATTCCTTCTTCACCAACTGCCAGTAATTCATCTCCGAACTCAGACGACTCCAATGTGCCAAAGCCAGATGTTGTTGTTGACAACAAGAGAAAACTGATAATGATTCTATCCCTTACTTTGGGTTTCGTTTCATTGATTTGTTTGGTCTTTGCAATATCTATTTTCTTCACTTACAGGCGTCAAGTTAATAGGTATGCAATGTTGTCCGAAAGTGAAAAACTTGAATATACTGAAGAATGCTCCTTGCGTTCATTCTCTTTTGACGAACTTGTAAAGTCAACAACGGAATTTTCAGAAGAGATAGGGAGAGGATCATTTGGAGCTGTTTATAAAGGTAAAATAGGTGATACTAACAGAAGTATTGCGGTGAAGAGACTGGATGAGAGAATTGATGATGAAGGGGAAAGGGAATTCCAAGCTGAAATTACTGCTATTGCTCGAACTCATCACAGAAATTTGGTTAAGCTTATTGGTTTTTGCATAGAAGGATCAAAGAAGCTCCTTGTTTATGAATTTGTTAGCAAAGGCTCTCTTGCAAATCTCCTCTTTGAAAGCGAAACAAGAATATCATGGAAAGAGAGAATGAAACTTGCATTGGACGTTGCTAGAGGACTGCTGTATTTACATGAAGAATGTGAAGTCCGAATCATCCATTGCAAAATAAATCCTCGAAATATACTTATGGATGAAGCATGGACCGCAAAAATATCTGATTTTGGATTGGCAAGGCTATTAAAGAGGGGTCATTCAAGAATTAATATGGAGGATGGTCATGGTACAAGCAGGTACTTGGCTCCAGAATGGCAGAAAGAGGATACATCTATCTCAGTAAAAGCTGACATTTACAGTTTTGGGGTGGTCTTGTTGGAGATTATCTGCCGCAGAAGAAGTATAGAGATGAATAATATTTCTTCAGCTGACGAAATTCTTCTCTCCAGCTGGGTATATCAATGTTTGGCAGCAGAGGAGTTAAACAAGCTTATCAGACAAGAAAAAGATGTGGATTGGAAGATATTGGAAAGAATGGTGAAGGTGGGGCTGTGGTGTGTGCAAGACCACCAATCTCTCCGTCCTACAATGAAGAATGTAATACTGATGCTGGAAGGTTTGAAAGATATTCCAGTTCCTCCATCTCCATCTGGCTCAGTTGGATAG 2427 0.3951 MASTFVLLLLLFLFMLFTIEATNTKTQKHDSSSIIPLGSSLSPKGENSSWSSSSGHFAFGFYPQGSGFAVGIWLVSPSANTTTVVWTANRDEPIVSSESMLNFTEHGLLLQNGNRDSLTNIDSEYLKTGIVSWASMLDSGNFVIYDEDSNVIWQSFDYPTDTLLGGQNFTDSVYLLSSISSFDHSSGRYYLKLRSDGKVAAYPIYSSRSSQDVYFEQQGCLCSDGGPNYRICYKSSNKPGKKTHSNTTSIYRATLDIDGNLRLYEHQFHFEGYNSYHVVMLWQALNDTCLVKGICGLNSYCSSNMSGDAVCKCYSGFIPSKTKSSPNMPIDCVQMNNRDNCESSEGPMLLYNFTRYKNISWSDFPYSIIPMMKVETCEKACQQDCVCGGAIYVYTDGSCNKYRLPLKYGRVQNDSSNVSMALLKIPSSPTASNSSPNSDDSNVPKPDVVVDNKRKLIMILSLTLGFVSLICLVFAISIFFTYRRQVNRYAMLSESEKLEYTEECSLRSFSFDELVKSTTEFSEEIGRGSFGAVYKGKIGDTNRSIAVKRLDERIDDEGEREFQAEITAIARTHHRNLVKLIGFCIEGSKKLLVYEFVSKGSLANLLFESETRISWKERMKLALDVARGLLYLHEECEVRIIHCKINPRNILMDEAWTAKISDFGLARLLKRGHSRINMEDGHGTSRYLAPEWQKEDTSISVKADIYSFGVVLLEIICRRRSIEMNNISSADEILLSSWVYQCLAAEELNKLIRQEKDVDWKILERMVKVGLWCVQDHQSLRPTMKNVILMLEGLKDIPVPPSPSGSVG 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01605 808 CDD B_lectin 57 159 IPR001480 -
Vivi1g01605 808 Gene3D Transferase(Phosphotransferase) domain 1 597 798 - -
Vivi1g01605 808 MobiDBLite consensus disorder prediction 427 446 - -
Vivi1g01605 808 ProSiteProfiles Protein kinase domain profile. 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01605 808 PIRSF SRK 1 807 IPR024171 GO:0004674
Vivi1g01605 808 Pfam D-mannose binding lectin 83 169 IPR001480 -
Vivi1g01605 808 ProSitePatterns Protein kinases ATP-binding region signature. 525 548 IPR017441 GO:0005524
Vivi1g01605 808 Gene3D - 28 157 IPR036426 -
Vivi1g01605 808 ProSiteProfiles Bulb-type lectin domain profile. 32 157 IPR001480 -
Vivi1g01605 808 Gene3D Phosphorylase Kinase; domain 1 491 596 - -
Vivi1g01605 808 MobiDBLite consensus disorder prediction 427 442 - -
Vivi1g01605 808 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 802 - -
Vivi1g01605 808 Gene3D - 158 272 IPR036426 -
Vivi1g01605 808 FunFam Putative receptor-like protein kinase 597 799 - -
Vivi1g01605 808 SMART blect_4 41 159 IPR001480 -
Vivi1g01605 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 205 IPR036426 -
Vivi1g01605 808 FunFam S-receptor-like serine/threonine-protein kinase 488 596 - -
Vivi1g01605 808 SUPERFAMILY Protein kinase-like (PK-like) 504 792 IPR011009 -
Vivi1g01605 808 Pfam Protein kinase domain 521 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01605 Vivi-Chr1 33997037 33999694 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01605 429 803 Receptor kinase-like Gene Family AT4G18250 39.378 3.76e-70 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi1g01605 Pkinase 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01605 - - cam:101496142 1126.31