Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01604 ATGGATGCATATGCTGCAACTATCACCTTATCTCTATTCATGTCCTTACTATTACCAAGTACTACAGCTGAAACACAACCACCACGAATATCTCCCGGTTCCTCTCTTTTCATTAGCAGTGGTTATCTCTCTTCATGGACTTCCAATTCTAGCCTATTTTCTTTTGGCTTTTATCCACAAGGCAGTGGCTTTCTAGTTGGAATTTGGTTGGTTGGAAAGAAGAACAACACAATTGTATGGACTGCAAACCGTGATGACCCTCCGGTATCCTCAACTTCAAAGCTACAATTTACCATAAACGGTACAATAATACTAACGGATCAACATGGACAAGAGAAGCTTATTGTTAATGCTAATGCAAGAGCTTCATCTGCCTCCATGCTTGATTCTGGAAACTTTGTATTATATGACTACAATAATATTTCCAAAATCATATGGCAGAGTTTCGATCATCCAACTGATACTTTGTTGGAGGGTCAATCTCTACCGTCTGGAAGCCAACTTTTCTCTAGTACATCGGGGGCCAACAGCTCAACTGGAAAGTTTCGTCTCCACATGCAGATTGACGGTAATCTTGTTCTGTATCCAGTATACACAACAGAAACGGGTTGGGATGCTTATTGGAGCACTCACACTAATAGGGTCATTTGGCCAACTGTCCAATATCATCTTTACCTCAACTATACAGGTTTACTGCTGATCTGGAATAGAAGCAGTGATGATAACCTTATTCATATTGTGAATGATAATGATAGAGCGGACAAGCAGAACACTGGAGACAAGACTATATATCGTGCAACCCTTGATTTTGATGGGGTTTTTCGGCTGTATGCATATCATGTTAACAATAGAAGTAACGGTATTATGGATAGTTGGCCGGAGAAGAATACATGTGAGGTGAACGGGTATTGTGGCTACAACAGTTTCTGCACATTCAATGACGACAAACCAGTGTGCAATTGCTTCACCGGTTATAAATTTATAGATGTAAATGATTATACTCTTGGATGTGAAAGGAACTATTCAAAATCAGAGTGTAGAAGTGACAAAGATGGTGTGGCCTTTTATAACATGGTCCCAATGGACAATCTTTATTGGAATGACCATCCTTATTTCATAGATGAACACATGTCATCAGATCAGTGCTCATATGCTTGCTTGGTTGATTGCGACTGTTGGGCTGCAATTTATGACACTGGAGATGGCTGCAAGAAACAAGGAATGCCTTTGAGATATGTCAAACGATCGCATGATTCTGAAGGTTCTACCTTGACTTTCTTAAAGGTTGGAAAAACCAGCACTCCAAGCTCAAAGAGGTATGAAAAACCTATTACTTTTCCAATCAAGATTACAAATAACAAAGCAATAGTGAATATTATTGTTGTTACATCCGTATTTAGTATTGTTTTGTGTTCGGTGATTGTTATATCCATTCATTATATATACAAGATTCGGGTATTGAAATACAAAAGGATAACAGAGACTTGGAAATTCGGAGGGAGGAATGATGAGGTGTCTTTGAGAAGGTTTACATACAATGAGCTTAGAAGAGCAACAAATCATTTCAAGGAAGAGTTGGGTAAAGGCTCTTTTGGAGCAGTTTACAAAGGAGAATTAAACAAAGGTAAGAAATTGATTGCAGTGAAGAGACTAGAGAAGTTGGTGGAAGATGGAGAAAGAGAGTTCCAAGCAGAAGTGAGAGCCATTGGAAAAACCCACCACAGGAACCTAGTTAGATTGCTTGGATTTTGTGCTGAGGGAACTAAAAGGCTTCTGGTTTATGAATACATGAGCAATGGCTCACTTGGAAAGCTTCTGTTTGGTGATCAAAGACGCCCGAATTGGGATGAGAGAGTGAGAATAGCACTGGATATTGCTAGAGGGATGTTGTATCTCCACGAAGAGTGTGAGGCACCAATCATTCATTGCGACATAAAGCCTCAAAACATTTTGATGGATGAGTTTTGGAATGCCAAGATATCTGATTTTGGTCTTGCAAAACTTCTAATGCCGGACCAAACCAGAACTTTCACGGTGGTTAGAGGAACAAGAGGCTATATGGCTCCGGAATGGAACAGGAACGTGCCAATTTCACTGAAGGCGGATGTTTATAGCTATGGAATAATGCTGTTGGAAATTTTGTGCTGCAGAAGAAACCTAGATGTTAATATGTTGGAACCTGAGGAGATTCTTCTCTCTGGTTGGGCTTATAAGCGCTTTGTTGCAGGAGAGGCGAATATGCTTGTACCTTGGGAAGTCGTTGATAACAATGTCTTGGAAAATATGATTAAGGTGGCACTTTGGTGTATCCAAGATGACCCTTTTCATAGGCCAACAATGAAGGGTGTGGTGTTGATGTTAGAAGGAGTTACTGATATAACAATTCCTCCCTGTCCAGATTCCAATCCTGCATGA 2415 0.4004 MDAYAATITLSLFMSLLLPSTTAETQPPRISPGSSLFISSGYLSSWTSNSSLFSFGFYPQGSGFLVGIWLVGKKNNTIVWTANRDDPPVSSTSKLQFTINGTIILTDQHGQEKLIVNANARASSASMLDSGNFVLYDYNNISKIIWQSFDHPTDTLLEGQSLPSGSQLFSSTSGANSSTGKFRLHMQIDGNLVLYPVYTTETGWDAYWSTHTNRVIWPTVQYHLYLNYTGLLLIWNRSSDDNLIHIVNDNDRADKQNTGDKTIYRATLDFDGVFRLYAYHVNNRSNGIMDSWPEKNTCEVNGYCGYNSFCTFNDDKPVCNCFTGYKFIDVNDYTLGCERNYSKSECRSDKDGVAFYNMVPMDNLYWNDHPYFIDEHMSSDQCSYACLVDCDCWAAIYDTGDGCKKQGMPLRYVKRSHDSEGSTLTFLKVGKTSTPSSKRYEKPITFPIKITNNKAIVNIIVVTSVFSIVLCSVIVISIHYIYKIRVLKYKRITETWKFGGRNDEVSLRRFTYNELRRATNHFKEELGKGSFGAVYKGELNKGKKLIAVKRLEKLVEDGEREFQAEVRAIGKTHHRNLVRLLGFCAEGTKRLLVYEYMSNGSLGKLLFGDQRRPNWDERVRIALDIARGMLYLHEECEAPIIHCDIKPQNILMDEFWNAKISDFGLAKLLMPDQTRTFTVVRGTRGYMAPEWNRNVPISLKADVYSYGIMLLEILCCRRNLDVNMLEPEEILLSGWAYKRFVAGEANMLVPWEVVDNNVLENMIKVALWCIQDDPFHRPTMKGVVLMLEGVTDITIPPCPDSNPA 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01604 804 CDD B_lectin 48 152 IPR001480 -
Vivi1g01604 804 PIRSF SRK 1 803 IPR024171 GO:0004674
Vivi1g01604 804 FunFam S-receptor-like serine/threonine-protein kinase 490 596 - -
Vivi1g01604 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 213 IPR036426 -
Vivi1g01604 804 ProSiteProfiles Bulb-type lectin domain profile. 21 148 IPR001480 -
Vivi1g01604 804 SMART blect_4 35 152 IPR001480 -
Vivi1g01604 804 Gene3D Transferase(Phosphotransferase) domain 1 597 795 - -
Vivi1g01604 804 Pfam Protein kinase domain 522 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01604 804 CDD STKc_IRAK 526 789 - -
Vivi1g01604 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 597 795 - -
Vivi1g01604 804 ProSitePatterns Protein kinases ATP-binding region signature. 526 549 IPR017441 GO:0005524
Vivi1g01604 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 799 - -
Vivi1g01604 804 Pfam D-mannose binding lectin 77 162 IPR001480 -
Vivi1g01604 804 Gene3D - 150 245 IPR036426 -
Vivi1g01604 804 SUPERFAMILY Protein kinase-like (PK-like) 505 788 IPR011009 -
Vivi1g01604 804 Gene3D Phosphorylase Kinase; domain 1 487 596 - -
Vivi1g01604 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Vivi1g01604 804 ProSiteProfiles Protein kinase domain profile. 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01604 804 FunFam Serine/threonine-protein kinase 152 289 - -
Vivi1g01604 804 SMART serkin_6 520 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01604 804 Gene3D - 29 149 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01604 Vivi-Chr1 33989532 33992263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01604 476 799 Receptor kinase-like Gene Family AT4G04540 41.265 1.67e-68 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi1g01604 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01604 - - gmx:100815958 927.161