Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01602 ATGGATGCCTATACTGCAACTGCCACCATCCTGCTGATCATGTACTTATCAGTACCAAATAATGGAGCTCAAACACATCAAAAACTACCAGAGCGGATAGCACCAGGTTCCTCACTTTCCCCTACTGGCAGTGATTACAACTCTTTATGGCTTTCCCGTTCTGGCCTATTTGCTTTTGGCTTTTATACACAAGACAACAATGGCTTTGTGGTTGGAATTTGGTTGGTTGGTAAGATGAGTAGGACGATAGTATGGACTGCAAACCGTGATGACCCTCCGGTATCCTCAACTTCAAAGCTACAATTTACCACGAACGGGATAATACTAACTGATCAACATGGACAAGAGAAGCTTATTGTTAATGCTAATGCAAGAGCTTCCTCTGCATCCATGCTTGATTCTGGCAACTTTGTACTATATGACTACAATAATATTTCCAGAATCATATGGCAGAGTTTCGATCACCCCACGGATACTTTGTTGGGGAGTCAATCTCTACCTAGCGGAGGCCAACTTTCCTCTAGTTTATCAGATGCCAACAGCTCAACTGGGAGGTTTCGTCTTAACATGCAGGTTGATGGAAATCTTGTTTTGTATCCAGCATACACTACACAATCAGGTTGGGATGCTTATTGGTCCTCTAATACTGCTAGTGTCAATGTCAACTATCATCTTTACCTCAACAATACAGGTCTACTACAGATCTTGGATAGTAACCGTGATTCTAGTCTTATTACCACTTTGTTTGATGCGGAAAAACACCAGCAGAAGACTGGAGGAAACCAGACTATTTATCGTGCGACCTTGGATTTTGATGGGGTTTTTCGCCTATATGCTCATCCAAATAATAGTGCAAGTAACAAAATGATCACAAGTTGGCCCGGGAATAACCCATGTGAAGTAAAGGGGTTTTGTAGCTTCAACAGTTACTGCACATTCGATGACGACAAACCATTATGCAACTGCCTCAAGGGATACAAATTTATAGATGAAAATGAAAAGACTCTTGGTTGCGAAAGGAACTATTCGAAAGTAGAGTGTAGAGGTAATAATGATGGTGTGGCCTTTTATAACATAGTCCCGATGAACAATATTTTATGGGAGGACCATCCTTATTTTGAGACTAAAGATATGTCTTCGGAACAAGATTGCTCATCTGCTTGTTTGGTTGATTGCAACTGTTGGGCTGCACTGTATGATGATGGAGCAAGATCATGCAAGAAACAAGGGTTGCCTTTGAGATATGTCAGAAGAACACATGAAGATGACGAGTCGACCACAGCATTCTTAAAGGTGGGGAAAAACAGCATGGAAAACTGGAAGTTGAATGATACACAGTCCCCCCTACAACCATCACCACCTCCAATCAAGACTACCAGTAACGATGCGGTGGTGCATATTATTGTTGTTACATCAATATTTACTGTGCTTCTGGTTTCAGCAGTTGTTATATCCTGCCATTACATTTACAAGATTCGGGTATTGAGCTACAAAAGGTTATCGGACACTGTGAACATTGGGCTGAATGACGATGTGGCTTTGAGAAGGTTTTCATACAACGAGCTGAAAAGAGCAACAAATCAGTTCAAGGAAGAATTGGGTAAGGGATCTTTTGGATCTGTTTACAAAGGGACCTTAAACAGAGGTAAGAGATTGATTGCAGTGAAGAGACTAGAGAAGCTGGTGGAAGAAGGGGAAAGGGAGTTTCAAGCAGAGGTGAGATCCATTGGGAAAACCCACCACAGGAACCTAGTTAGATTGCTGGGTTTTTGTGTTGAGGGTTCGAAAAGGCTTCTGGTTTATGAGTACATGAGCAACAGTTCGCTTGGAAAGCTTCTCTTTGGTGATCAAAGACGTCCGGATTGGAATGAGAGAGTTAGAATAGCACTGGATATTGCGAGAGGAATTTTGTATCTCCATGAAGAGTGTGACGCTCCAATCATTCATTGCGACTTAAAGCCTCAAAACATTTTGATGGATGAGTTTTGGACCGCCAAGATATCGGATTTTGGGCTAGCAAAACTTTTAATGCCGGACCAAACCAGAACATTCACGATGGCCAGAGGTACAAGAGGATATATGGCCCCGGAATGGAACAAGAACGTGCCAATATCAGTGAAAACAGATGTTTATAGCTACGGAATAATGCTGTTGGAAATCTTATGTTGCAGAAGAAACATAGATGTTAATGTCTTGGAACCTGAGGAGGTTCTTCTTTCGGGTTGGGCCTATAAATGCTTTGTTTCAGGAGAGGTAAATAAGCTTGTACCTTGGGAAGTCATTGATAACAATGTGATGGAAAATATGATTAAGGTGGCACTGTGGTGTATCCAAGATGATCCTCTTCTCCGGCCAACAATGAAGGGTGTGGTGTTGATGTTAGAAGGGATCACTGATGTAGCAGTTCCTCCTTGTCCAGATTCCAGTTCCGCATGA 2436 0.4204 MDAYTATATILLIMYLSVPNNGAQTHQKLPERIAPGSSLSPTGSDYNSLWLSRSGLFAFGFYTQDNNGFVVGIWLVGKMSRTIVWTANRDDPPVSSTSKLQFTTNGIILTDQHGQEKLIVNANARASSASMLDSGNFVLYDYNNISRIIWQSFDHPTDTLLGSQSLPSGGQLSSSLSDANSSTGRFRLNMQVDGNLVLYPAYTTQSGWDAYWSSNTASVNVNYHLYLNNTGLLQILDSNRDSSLITTLFDAEKHQQKTGGNQTIYRATLDFDGVFRLYAHPNNSASNKMITSWPGNNPCEVKGFCSFNSYCTFDDDKPLCNCLKGYKFIDENEKTLGCERNYSKVECRGNNDGVAFYNIVPMNNILWEDHPYFETKDMSSEQDCSSACLVDCNCWAALYDDGARSCKKQGLPLRYVRRTHEDDESTTAFLKVGKNSMENWKLNDTQSPLQPSPPPIKTTSNDAVVHIIVVTSIFTVLLVSAVVISCHYIYKIRVLSYKRLSDTVNIGLNDDVALRRFSYNELKRATNQFKEELGKGSFGSVYKGTLNRGKRLIAVKRLEKLVEEGEREFQAEVRSIGKTHHRNLVRLLGFCVEGSKRLLVYEYMSNSSLGKLLFGDQRRPDWNERVRIALDIARGILYLHEECDAPIIHCDLKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTMARGTRGYMAPEWNKNVPISVKTDVYSYGIMLLEILCCRRNIDVNVLEPEEVLLSGWAYKCFVSGEVNKLVPWEVIDNNVMENMIKVALWCIQDDPLLRPTMKGVVLMLEGITDVAVPPCPDSSSA 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01602 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Vivi1g01602 811 PIRSF SRK 2 811 IPR024171 GO:0004674
Vivi1g01602 811 ProSiteProfiles Bulb-type lectin domain profile. 36 152 IPR001480 -
Vivi1g01602 811 FunFam Serine/threonine-protein kinase 156 290 - -
Vivi1g01602 811 Gene3D - 157 292 IPR036426 -
Vivi1g01602 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 180 279 IPR036426 -
Vivi1g01602 811 Gene3D Transferase(Phosphotransferase) domain 1 604 802 - -
Vivi1g01602 811 Gene3D - 27 154 IPR036426 -
Vivi1g01602 811 SMART blect_4 40 156 IPR001480 -
Vivi1g01602 811 FunFam Serine/threonine-protein kinase 157 302 - -
Vivi1g01602 811 CDD STKc_IRAK 533 797 - -
Vivi1g01602 811 FunFam S-receptor-like serine/threonine-protein kinase 498 603 - -
Vivi1g01602 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 604 802 - -
Vivi1g01602 811 ProSitePatterns Protein kinases ATP-binding region signature. 533 556 IPR017441 GO:0005524
Vivi1g01602 811 SUPERFAMILY Protein kinase-like (PK-like) 513 795 IPR011009 -
Vivi1g01602 811 ProSiteProfiles Bulb-type lectin domain profile. 157 290 IPR001480 -
Vivi1g01602 811 ProSiteProfiles Protein kinase domain profile. 527 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01602 811 SMART serkin_6 527 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01602 811 CDD B_lectin 42 156 IPR001480 -
Vivi1g01602 811 Gene3D Phosphorylase Kinase; domain 1 495 603 - -
Vivi1g01602 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 199 IPR036426 -
Vivi1g01602 811 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 42 807 - -
Vivi1g01602 811 Pfam D-mannose binding lectin 82 165 IPR001480 -
Vivi1g01602 811 Pfam Protein kinase domain 529 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01602 Vivi-Chr1 33978394 33981097 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01602 484 806 Receptor kinase-like Gene Family AT4G04540 41.566 6.44e-67 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi1g01602 Pkinase 4.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01602 - - gmx:100815958 972.615