Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01583 ATGAAGAAGGTGAGGAGAAAGATCGGAAAGTATGAAGTTGGTCGAACGATTGGTGAAGGTACATTCGCGAAGGTTAAGTTTGCGAAACACAGTGATACAGGGGAAAGTGTGGCGATTAAAGTCATGGCTAAGAGTACCATTCTCAAACACAGAATGGTTGAGCAGATTAAAAGAGAGATATCCATTATGAAGATTGTCAGGCACCCTAATATAGTCAGATTGCACGAGGTTTTGGCCAGTGAGAGCAAGATCTACATAATTCTGGAGTTTGTAATGGGAGGGGAATTATATGATCAAATTGTACAGCAGGTAAAGCTTTCTGAAAATGAATCTAGGCGCTACTTTCAACAACTTATAGACGCCGTTGCTCACTGTCATAATAAGGGCGTGTACCATAGAGACTTGAAGCCTGAAAATCTTCTTCTCGATGCTTTCGGAAATTTGAAGGTTTCTGACTTTGGATTGAGTGCATTGACTAAGCAGGGCGATGACCTTCTTCACACAACATGTGGAACCCCAAATTATGTTGCCCCTGAGGTGCTCAACAATCAAGGTTATGATGGTGCCGCAGCTGATGTATGGTCATGTGGAGTCATTCTATATGTTCTAATGGCTGGATATCTTCCATTTGAGGAGGCTGACCTTCCGACGTTGTTCAGAAGGATCAGTGCTGCAGAATTTGTTTGCCCACTCTGGTTTTCTGCTGGCGCAAAGACATTGATACATAAAATTTTGGATCCTAATCCTAAAACACGTGTTAAAATAAAAGAAATAATGCAAGATCCATGGTTCAAGAAAAACTATTCTCCTGTCAAACTCAGAGAAGACGAGAAAGTGAATTTGGATGATGTTCAGGCTGTTTTTAATGATATTGAGGACCTCTATGTTTCTGAACGGTCACAAATCAGCGAGGGAGGTCCTTTGATAATGAATGCATTTGAGATGATAACCTTATCACAAGGGTTGAATCTTTCACCACTATTTGACAGGCATCAGGATTATGTAAAACGGCAGACTCGTTTTGTTTCACGTAAACCAGCAAAAGATATAATTTCATCTATCGAAGCTGTTGCAGGCTCAATGGGTCATAAGGTCCATTGTCGCAATTACAAGATGAGGATTGAAAGAGTTTCTTCAAATAAGGTTGGACAATTTGCAGTGGTCTTGGAGGTGTTTGAAGTTGCACACTCCCTTTTCATGGTAGATGTTCGAAAGGCAGCTGGGGATACTCTTGAGTATCACAAGTTCTACAAGAACCTTTGTGCGAAACTAGAAAGCATTATTTGGAGACCGGACGAGACTAGCCCAGATTCTGGTTTGATTCGACAAATGACATTCTGA 1341 0.4109 MKKVRRKIGKYEVGRTIGEGTFAKVKFAKHSDTGESVAIKVMAKSTILKHRMVEQIKREISIMKIVRHPNIVRLHEVLASESKIYIILEFVMGGELYDQIVQQVKLSENESRRYFQQLIDAVAHCHNKGVYHRDLKPENLLLDAFGNLKVSDFGLSALTKQGDDLLHTTCGTPNYVAPEVLNNQGYDGAAADVWSCGVILYVLMAGYLPFEEADLPTLFRRISAAEFVCPLWFSAGAKTLIHKILDPNPKTRVKIKEIMQDPWFKKNYSPVKLREDEKVNLDDVQAVFNDIEDLYVSERSQISEGGPLIMNAFEMITLSQGLNLSPLFDRHQDYVKRQTRFVSRKPAKDIISSIEAVAGSMGHKVHCRNYKMRIERVSSNKVGQFAVVLEVFEVAHSLFMVDVRKAAGDTLEYHKFYKNLCAKLESIIWRPDETSPDSGLIRQMTF 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01583 446 Gene3D Transferase(Phosphotransferase) domain 1 2 309 - -
Vivi1g01583 446 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01583 446 Pfam NAF domain 307 366 IPR004041 GO:0007165
Vivi1g01583 446 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Vivi1g01583 446 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 423 - -
Vivi1g01583 446 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Vivi1g01583 446 Gene3D Kinase associated domain 1, KA1 310 430 - -
Vivi1g01583 446 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524
Vivi1g01583 446 FunFam Non-specific serine/threonine protein kinase 4 304 - -
Vivi1g01583 446 CDD CIPK_C 311 421 - -
Vivi1g01583 446 FunFam Non-specific serine/threonine protein kinase 304 430 - -
Vivi1g01583 446 SMART serkin_6 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01583 446 SUPERFAMILY Protein kinase-like (PK-like) 8 319 IPR011009 -
Vivi1g01583 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Vivi1g01583 446 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01583 Vivi-Chr1 33463719 33474170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01583 1 372 CBL-interacting serine-threonine protein kinases AT5G35410 73.118 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vivi1g01583 Pkinase 4.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01583 - - tpra:123920042 797.734