Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01509 ATGGCTTTTCCTCTTATAGCAAGAAATCCTACACTCCACACTCACCAATTCACCGCATTATCTTCCTTCAGAGCCAAATCACTTTCCATTCACAATTTCGCAAAGATGGGAGGAAGTGAAATCACTGAAGTGGCACAGAGAGTAGGTGATGATGATTTGAGTTTGAAGAAGAAGATTTTTGTTGCTGGAGCTACTGGTAGCACTGGGAAAAGAATAGTGGAACAGTTGTTGGCTAAGGGTTTTGCTGTTAAGGCTGGGGTTAGAGATTTGGACAAGGCGAAGACTACACTTTCGTCTACCAATCCGTCTCTACAGTTTGTGAGAGTTGATGTTACTGATGGTTCTGATAAGCTAGCTGAAGCTATTGGCGATGATACTGAAGCAGTAGTTTGTGCTACTGGATTTAGGCCAGGGTGGGATTTGCTTGCTCCTTGGAAGGTTGACAATTTTGGCACAGTGAACCTTGTTGAAGCATGCAGGAAAGTCAATGTTAACAGATTCATTCTTATAAGTTCTATTTTAGTCAATGGAGCAGCTATGGGACAGCTACTCAATCCAGCTTACATTTTTCTCAATGTTTTCGGACTCACCTTAGTAGCAAAGTTACAGGCAGAAAATCATATCAGGAAATCTGGTATAAATTACACAATCATAAGGCCTGGAGGTTTGAAAAACGATCCTCCTACCGGAAATGTTGTTATGGAGCCAGAGGATACACTATATGAAGGTTCCATATCCAGAGATTTAGTTGCAGAGGTAGCTGTGGAATCATTGGCTTATCCTGAGTCATCTTATAAAGTTGTGGAGATAGTTGCTCGACCTGATGCTCCTAAACGTGCTTACCATGATCTTTTTGGTTCTATAGTTCAGCGATGA 876 0.4155 MAFPLIARNPTLHTHQFTALSSFRAKSLSIHNFAKMGGSEITEVAQRVGDDDLSLKKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSSTNPSLQFVRVDVTDGSDKLAEAIGDDTEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKVNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLKNDPPTGNVVMEPEDTLYEGSISRDLVAEVAVESLAYPESSYKVVEIVARPDAPKRAYHDLFGSIVQR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01509 291 PANTHER FLAVIN REDUCTASE-RELATED 40 289 - -
Vivi1g01509 291 CDD SDR_a5 58 273 - -
Vivi1g01509 291 Pfam NAD(P)H-binding 63 259 IPR016040 -
Vivi1g01509 291 Gene3D - 55 291 - -
Vivi1g01509 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 57 271 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01509 Vivi-Chr1 31656519 31659240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01509 56 188 Monolignol Biosynthesis Gene Families AT2G33590 32.394 5.29e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01509 - - gmx:100792523 456.447