Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01485 ATGGGAGCTGTTATTCTCCCAGATCTCGGTACCGAGATTTTGATTCCCGTTTGCGCCGTCATTGGAATCGCTTTTGCGCTTTTCCAATGGCTTCTTGTTTCGAAGGTGAAGCTCACCGCTGGAAGGGAGACGGTTCCTGAAACGCCCGGGAAGAATGGGTACAACGATTCGCTTATTGAGGAAGAGGAGGGGATTAACGACCATAACGTTGTTCTCAAATGTGCTGAAATCCAGAACGCTATTTCTGAAGGATCAACCTCTTTCCTTTTCACTATGTACAAGTATGTGGGTATCTTCATGGTGGCTTTTGCCATCTTGATATTCCTCTTCCTTGGCTCTGTGGAAGGATTCAGCACAAGCCATCAGCCTTGCACTTATGATGAAACTAAGATGTGCAAGCCGGCTCTTGCCACAGCCCTTTTCAGCACCATAGCTTTTGTGCTTGGTGGCATCACATCCGTTATTTCTGGTTTCCTCGGAATGAAGATTGCCACCTATGCCAATGCAAGAACCACCCTGGAGGCAAGAAAGGGTGTTGGGAAAGCTTTCATTACTGCATTCAGATCAGGTGCAGTTATGGGATTTCTCCTTGCTGCCAATGGTCTTTTGGTTCTTTACATTACCATCAACTTGTTCAAGATTTACTATGGTGATGACTGGGGTGGTCTTTTTGAGGCTATCACTGGTTATGGTCTTGGCGGTTCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATCTACACTAAGGCTGCTGATGTTGGTGCCGATCTTGTCGGCAAGGTTGAGAGAAACATTCCTGAGGATGATCCTAGGAATCCAGCTGTTATTGCTGATAATGTTGGTGACAATGTTGGGGATATTGCTGGCATGGGATCCGATCTATTTGGTTCATATGCAGAGGCATCTTGTGCTGCCCTTGTTGTTGCCTCCATCTCTTCTTTCGGGATCGAACATCAATTCACTGCCATGTTGTTCCCTCTCATCATCAGTTCTGTGGGCCTCCTTGTTTGTTTGCTCACCACCTTATTTGCAACTGACTTTTTTGAGATCAAGCTTGTAAAGGAAATTGAGCCAGCATTGAAGAAACAGCTTGTTATTTCAACAGTATTGATGACTGTTGGAATTGCAATTGTTAGTTGGATAGCACTCCCATCTTCCTTCACCATCTTCGATTTTGGAGTGCAGAAAGTTGTCAAGAACTGGCAGCTATTCTTGTGTGTGTCTGTTGGTCTTTGGGCAGGTCTTATCATTGGATTTGTTACTGAATACTATACCAGTAATGCATACAGCCCTGTGCAAGATGTTGCTGATTCCTGCAGGACTGGTGCTGCTACCAATGTTATCTTTGGCCTTGCCTTGGGATACAAGTCTGTTATCATTCCAATTTTTGCCATTGCAATTAGTATTTTTGTTAGTTTCAGTTTTGCTGCCATGTATGGTGTTGCTGTTGCCGCTCTTGGAATGTTGAGTACCATAGCAACTGGATTAGCCATTGATGCATACGGTCCAATCAGTGACAATGCCGGAGGTATTGCTGAGATGGCTGGAATGAGTCACAGAATTCGTGAGAGAACCGATGCTCTTGATGCTGCAGGAAACACAACTGCTGCCATTGGAAAGGGATTTGCTATTGGTTCTGCCGCCCTTGTTTCTCTTGCCCTTTTTGGTGCCTTTGTGAGCCGTGCTGGCATTACAACAGTCGATGTCCTGACTCCTAAGGTTTTCATTGGTCTGCTTGTCGGTGCTATGCTCCCTTACTGGTTTTCTGCCATGACAATGAAGAGTGTCGGAAGTGCAGCATTGAAGATGGTTGAGGAAGTTCGCAGGCAATTCAACACTATCCCTGGATTGATGGAGGGAACTGCCAAACCTGACTATGCCACTTGTGTTACCATCTCCACCGACGCTTCCATCAAAGAAATGATCCCACCAGGTGCCCTTGTCATGCTAACACCCCTTATTGTTGGGATCTTCTTTGGTGTTGAAACACTATCTGGTGTCCTTGCTGGATCTTTGGTTTCTGGTGTCCAGATTGCTATCTCTGCATCCAACACTGGCGGTGCTTGGGATAATGCCAAGAAGTACATTGAGGCTGGTGTCTCAGAGCATGCAAGAAGCCTAGGTCCAAAGGGGTCAGACCCACACAAGGCAGCAGTTATTGGTGACACCATTGGAGACCCATTGAAGGACACATCCGGACCTTCACTCAACATCCTTATCAAATTGATGGCAGTTGAGTCATTGGTGTTTGCTCCTTTCTTTGCAACTCACGGTGGTCTTCTCTTCAAGTTTTGGTAA 2301 0.4589 MGAVILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLTAGRETVPETPGKNGYNDSLIEEEEGINDHNVVLKCAEIQNAISEGSTSFLFTMYKYVGIFMVAFAILIFLFLGSVEGFSTSHQPCTYDETKMCKPALATALFSTIAFVLGGITSVISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYITINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAEASCAALVVASISSFGIEHQFTAMLFPLIISSVGLLVCLLTTLFATDFFEIKLVKEIEPALKKQLVISTVLMTVGIAIVSWIALPSSFTIFDFGVQKVVKNWQLFLCVSVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVTISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGVSEHARSLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKFW 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01485 766 Pfam Inorganic H+ pyrophosphatase 21 751 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vivi1g01485 766 NCBIfam V-type H(+)-translocating pyrophosphatase 11 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vivi1g01485 766 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vivi1g01485 766 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vivi1g01485 766 PIRSF H+-PPtase 11 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01485 Vivi-Chr1 31342860 31347089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01485 5 629 Primary Pumps ATPases AT1G15690 88.694 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01485 K23025 - gmx:100775864 1393.25