Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01481 ATGATCATGGGATATCAAAAGCCTGCATGGTTGGAAGCTCTTTATGCAGAAAAGTTCTTTGTTGGTTGCTCTTATCATGAAAATGCAAAAAAGAATGAGAAGAATGTTTGTTGCTTAGATTGTTGTACAAGTATTTGTCCTCATTGTTTGCCGTCTCATCGCTTCCACCGCCTTCTTCAAGTCCGTCGTTATGTTTATCATGATGTTGTTAGATTGAAAGATCTTCAGAAACTTATTGACTGTTCCAATGTCCAGGCCTATACTATCAATAGTGCTAAAGTGGTTTTCATCAAGAAGAGGCCTCAAAATCGACAATTCAAAGGATCGGGAAACTATTGTACTTCATGTGATAGAAGCCTTCAAGAACCTTTTATTCATTGCTCTCTTGGATGCAAGGTGGATTTTGTGCTGAAACACTACAGGGATCTTTCACCCTACTTAAGGACATGCAACATCCTACAACTAAGTCCTGATTATCTCATTCCACAAGAAATGGGAGAAGAAGAGATGACAAGATCAACAATTGATGAACAAATGAGTTCATATTCAGGATCATCATCATCATCAGGGTCAGAAAATATGAGCATTGCATGCACAGAAATTGTAAGGAAAAGAAGAAGTGGATGGACAAGCATGTGTGCAAAATTCATGACCAAAAATAATATTATCAATAAAGTTTCTGATGAAGACATGGCTTCAAGTATGATTAGTAGAAGAAAAGGAATCCCTCATAGATCTCCTCTATGTTAG 750 0.372 MIMGYQKPAWLEALYAEKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLKDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYRDLSPYLRTCNILQLSPDYLIPQEMGEEEMTRSTIDEQMSSYSGSSSSSGSENMSIACTEIVRKRRSGWTSMCAKFMTKNNIINKVSDEDMASSMISRRKGIPHRSPLC 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01481 249 Pfam PLATZ transcription factor 62 133 IPR006734 -
Vivi1g01481 249 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01481 Vivi-Chr1 31021396 31023308 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi1g01481 PLATZ 5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01481 - - gmx:100785737 446.817