Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01466 ATGACGAAGCTCAAGGGAGGAACAAGGCCACCTTGGGTAGGACTTGGAGCTGCAGTTTGGGTTCAAATAGCCGTAGGAAACGCTTACACATTCCCTCTCTATTCACCTTCCTTCAAATCTGTTCTTGGTTTCAATCAAAGACAGGTTTCTCTTCTTGGTGTTGCTAATGATATTGGTGAGAATGTTGGTCTTCTTCCTGGTATTGTTTGCAACAAGTTCCCTCCTTGGCTTATGCTTTTCATTGGTGGTCTTTTCTCTTTCCTTGGTTTTGGTCTTCTATGGCTTTCTGTCTCACAAACACTTCCTTCACTTCCTTATCCTCTGCTATGGTTTGCACTTGTTATTGCTACCAACAGTTGTGCATGGTTGACCACTGCTCTTCTTGTGACAAACATGAGAAATTTTCCTGTAAGTAGAGGAACAGTTGCAGGTATACTAAAAGGTTATGGAGGGATCAGTGCCGCGGTTTTCACCGAAATCTTCAGGGCACTTCTTCATAATTCTCCTTCAAATTTTCTCTTGTTCCTTGCCATTGGAATTCCTGTTTTGTGCTTTACTGTAATGTTTCTCGTTCGTCCTTGTACACCAGTTACCGGTGAGAGTTCTTCGGAAAAATGGTATTTTCTTTTCATCCAAGGTTCGAGTGTGGCCTTAGGTGTATATTTACTTGTAACTACGACACTCGATTACATTCTCCATATTGATTCTACCGTGTCTTATGTTTTGGTGGCTGTGATGATTCTTCTTCTCGCGGCTCCACTTGCTATTCCTGTAAAGATGACACTCTTTCCTCAAAAAGTCACTCAATCAGAAGAGAATGAGGTAGTTGAAAGCAAAGAAGAAGAAAACACGAAACCCCTTTTACATGTGTCTTCGTCGGCTAATGTGCTTGGTAGTTTAAATGACGCTGATAGTTCATCTGAGATTGGTATGCTTCTTGCTGAGGGTGAAGGAGCAGTAGTACCTTCGAAAAAGAGAAGGCCGAGAAGAGGGGAAGATTTTACGTTTTTGGAGGCCTTGGTTAAGGCTGATTTCTGGCTTTTATTTTTTGTTTATTTCGCTGGTGTTGGAACTGGTGTTACTGTTATTAATAATCTGGCTCAAGTAGGTGCGGCTCAAGGTGTTGAAGATATCACTATCTTACTCTCGGTTTTCAGTTTTTTCAATTTCGTCGGGCGCCTCGGTGGAGGAGTTGTTTCTGAACATTTTGTCAGGACAAGAACGATCCCACGGACGGTTTGGATGACATGCACACAGATAATCATGATAATCTTGTATCTTCTATTCGCACATGCCATCAAAGGAACACTTTATCCAGCAGTTGGATTTCTCGGCATCTGTTACGGTGTACAATTTTCAATACTGATTCCAACAGTCTCAGAGCTTTTTGGTTTGAAGCACTTTGGCTTATTCTTCAACTTCATGTCATTAGGTAATCCACTTGGCGCATTACTTTTCTCAGCGCTTCTAGCCGGACGTATATACGACAGTGAGTTGGCAAAGCAACAAGCACTCGGTTTCGTTGTTTCAAGTGCTTCATGTGTCGGTCCAGATTGTTTTAGGATTACGTTTCTGGTCCTTGCTGCTGTGTGCGTTGCTGGTACAGTCTCCAGCATTATCTTGAGCATACGAATTAAGCCCGTTTACCAAATGCTTTACGCCGGTGGCTCTTTCAGGCTGCCTCAAGTAACATGCCAGTGA 1701 0.4268 MTKLKGGTRPPWVGLGAAVWVQIAVGNAYTFPLYSPSFKSVLGFNQRQVSLLGVANDIGENVGLLPGIVCNKFPPWLMLFIGGLFSFLGFGLLWLSVSQTLPSLPYPLLWFALVIATNSCAWLTTALLVTNMRNFPVSRGTVAGILKGYGGISAAVFTEIFRALLHNSPSNFLLFLAIGIPVLCFTVMFLVRPCTPVTGESSSEKWYFLFIQGSSVALGVYLLVTTTLDYILHIDSTVSYVLVAVMILLLAAPLAIPVKMTLFPQKVTQSEENEVVESKEEENTKPLLHVSSSANVLGSLNDADSSSEIGMLLAEGEGAVVPSKKRRPRRGEDFTFLEALVKADFWLLFFVYFAGVGTGVTVINNLAQVGAAQGVEDITILLSVFSFFNFVGRLGGGVVSEHFVRTRTIPRTVWMTCTQIIMIILYLLFAHAIKGTLYPAVGFLGICYGVQFSILIPTVSELFGLKHFGLFFNFMSLGNPLGALLFSALLAGRIYDSELAKQQALGFVVSSASCVGPDCFRITFLVLAAVCVAGTVSSIILSIRIKPVYQMLYAGGSFRLPQVTCQ 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01466 566 SUPERFAMILY MFS general substrate transporter 213 547 IPR036259 -
Vivi1g01466 566 Gene3D MFS general substrate transporter like domains 12 199 IPR036259 -
Vivi1g01466 566 SUPERFAMILY MFS general substrate transporter 13 195 IPR036259 -
Vivi1g01466 566 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 550 - -
Vivi1g01466 566 Pfam Nodulin-like 11 258 IPR010658 -
Vivi1g01466 566 Gene3D MFS general substrate transporter like domains 341 548 IPR036259 -
Vivi1g01466 566 CDD MFS_Mch1p_like 10 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01466 Vivi-Chr1 30661216 30664542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01466 1 564 Nodulin-like Gene Family AT1G80530 58.875 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01466 - - gmx:100787328 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01466 1 30661216 30664542 Vivi1g01466 1 30661216 30664542 ECH
Vivi1g01466 1 30661216 30664542 Vivi4g01235 4 39939850 39943004 PCT