Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi1g01439 | ATGAATTTCGAATGGTTTCGTTTTTCCGTTGGATTTGTTGCAGGGAAGGGTTCATATGGTGCTGTTTACAAAGCCAGGGATTATAGGACCTCTGAGATGGTTGTTGTCAAAGTCATATCATTATCTGAAGGGGAGGAGGAATATGAGGAAATTCGTGGTGAAATGTTGTCTGATATCTTGGAAGCTATCAAGGAGAGGAGTATCTTTGGCTCCATAGAGTTAAAATGA | 228 | 0.4035 | MNFEWFRFSVGFVAGKGSYGAVYKARDYRTSEMVVVKVISLSEGEEEYEEIRGEMLSDILEAIKERSIFGSIELK | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi1g01439 | 75 | Gene3D | Phosphorylase Kinase; domain 1 | 5 | 73 | - | - | |
| Vivi1g01439 | 75 | ProSiteProfiles | Protein kinase domain profile. | 8 | 75 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Vivi1g01439 | 75 | SUPERFAMILY | Protein kinase-like (PK-like) | 7 | 54 | IPR011009 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi1g01439 | Vivi-Chr1 | 29910983 | 29912012 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi1g01439 | 16 | 55 | MAP Kinase Kinase Kinase Kinase | AT1G69220 | 80.000 | 6.17e-16 | 68.6 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi1g01439 | - | - | vvo:131603686 | 129.028 |