Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01417 ATGCTTCCAGGAGTTGAATGTGCTAGAAGGAGACGGTTGCATCAAAGCAGAGGAAAAGAAGGAGGATATGGTGATTCCACAACAAGACGCTCATTCTGTTTATACACAAGAAACCTTCAATCTACTACTTCCTCATCAAAACCTTCTTTACTGGAAAGAAGCGTGTTAAAGCAGAAACAGTCATTGATTGATGAGAAACTGGGAGGATCAGCAAGAGAAGCCAAACGGAGATTAGATGAGAAGCTTAAAGCAAGTATGAAGTCAGAAGAAAATCAACAACAGAAAAGAAAAAGTATTTTTGGTGGTTTATTGCGGCAGTTTAAATCTTAA 330 0.3848 MLPGVECARRRRLHQSRGKEGGYGDSTTRRSFCLYTRNLQSTTSSSKPSLLERSVLKQKQSLIDEKLGGSAREAKRRLDEKLKASMKSEENQQQKRKSIFGGLLRQFKS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01417 109 Coils Coil 71 91 - -
Vivi1g01417 109 MobiDBLite consensus disorder prediction 83 109 - -
Vivi1g01417 109 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01417 Vivi-Chr1 29578175 29578853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01417 1 83 C3H Transcription Factor Family AT2G15580 44.681 4.31e-13 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01417 - - psat:127073449 159.458