Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01415 ATGGCGTTTGATCAGAATTCCGCTCCTACAGATCTACGAGTATTGAATGTGGCTCCCATAATGGTGGAGGAGCCTCTCATTTCTCCGGCCAGCGTCACCACGCCTCCCACTCCAGATTCCGTTTCCGATTATTTCTACCCGACCGCCGGCTCTTCCGCTGGCGCCACGTCAGCAACTTGGTGCGTTCGTCCCATTGTGAGCCCTCCTTCTATATATGGGAACCGCGTTGTTGCTGGAAATGCTTTGAATTTGGGAAATTGGGTAGGGGCTAATAGTAGCAATAATAATAATAATACTGGTTTGCATAATGTTTGTAATGATGGTGTACCTGTGACTGTGAGTGGTTTTTCTTATGCTGCTCATGGTGGAACTGGAACTGGACCTGGAACTAGAGTGGTTGATGATACCGGGGATGATTCAAATTCTGGGAGGAAAGTTAAGTTTCTGTGTAGTTTTGGCGGGAAGATATTGCCTAGACCGAATGACGGAGTGTTGAGATATGTTGGAGGACAGACGAGGATAATTAGTGTTAAGAAAGATGTGAGTTATAATGATTTGGTGCTAAAGATGGTGGATACTTATGGACAACCTGTGGTTATTAAGTATCAGTTACCAGAGGAGGATCTTGACGCTTTAGTTTCGGTTTCTTGCCCTGATGATGTTGAGAATATGATGGAGGAGTATGGGAAATTGGTTGAGAGGTCTCCGGATGGTTCTGCTAAATTGAGGGTTTTTTTGTTTCCGCTCTCGGAGGTTGATCTTTCTGGTGCAGTGCAGTCCGCGGATTTGCAGGATACGGGACAGAAGTATTTTGATGCGGTGAATGGTTTTATAGATGGGTATGGGGTTTGTTGTGGGCTCAAGAAGAAGGAGAGTGTTACAAGTGCGGCTTCCACGCAGAATTCTGATTTGAGTGGGATAGAGACTATTGATAGCTCGGTCGCTGGTCAAGGAGATTCGGCGTCGTGTGTGTTATCGCCTAGAGAGTATGTGGCTGCTTCTCCAGATACAGGTGTGAGTTTGGTGAATTCTGAGTCTAGTCCACCAGTTTACTCGGGTGCTTCTTCTGGTGTTTCCTTTGGCATGCCTGCGGGTAAGACTGGTCCGACATACACTTCGTATCCTCAGAATGAGGTTGAGTTAGAAAAGTCAGTGCCGGTTACTTTCTCTCAACAACCATTTGAACTGCACCAATCTGGAATGGAAATTCCACCATCTTCACCCTATTCGAACCATGCAGAGTATGTCCACTTGCCTCCTCAGATGGGGTTCCCAAATCCTCAGCTATTAGGAAAGACTGGGCCTGTTTTTGCCCAGCAACAGTTTCATAATAATAATAATACGCCTGGTTTAGCTTTCCGTCAGGTCATCCCCGGAGCACAAATGACAATGACTCAACCTTCTTCTCGCGTTGGTATAAGACCAAATGTCATCCAACCACAACCATTGATACAACCGCAACATAATCATTTGAACCAATACAATAATGAAAATACATCAGGAATACGGATTGTCCAGCTTCCTGCAGAACACAGCTACAATACATATCAGGTTCCGGTTAATCAAGTTCCAGTGAATCAAGTTCCATCTGTCATTGTTGGGGGTAATCGCGGTTGGGTTCAGGTTCCTCCACAAGAGCATGTTGTTTTCTCTGATGGGTCATTACCTCAACAAGTAATTATCCCAGAGAAAATCCAAAGAGTTGAGGAATGTTCTATGTGCCAGAAAAAGTTGCCTCATGCTCATTCAGACCCAGTGGTTCCGGATCAGCACGATGGCGGTTCAGGTCCAGTTCCTGATTCAATCCCATGTTATAATAGTTTTCCAATGGAGGACAATGTAAAAGCTCAAGCAACAAAGAGGGTTGAGCCTATGATGGCACTACCCTTGAAGGAAGGTGTTGTTGAACAAGGGTTTACCACAAAACCAAGTGTCATTAGCAAATTGGAAGTTCATAATGGAGTAAGACATTGTACTGATAATACTGGGATTTCTTATAATTTTGAACCTCAGCATGAAGGTAGGAAGATTTTTATTCAAAATCCAGAAGAATTTGACCATTCCATGAATTCATTAATCCAGGAAACAATTGGTAGGACAGATGGAAAACATTCTTCTAGGGATGGGCATGGGTCCACGGGAGCGACACCACCTTCTTATCCAGACGATATTGTCCGCCAGCATATGGCACCGGTTGAAACCTGGGTTAAACAAGATGAACACGCGAATAAACATGTTAATAGTGATATACCTATAGTTGATGGAACGACTTTACATACTCCGGAATGTGTTGCCCAAGGATCTTCCAAAGAATACACAAATGAGCCTACTGGTGTTGTTTCTAAATCAGATGCCGTAAATAATTGGATTAGACAGGGCTATGTAAGTCCTGTTGATGGAAGGAATGACATTCTCAAGATACACAATGCTGATGGTTATGTAAGTAATGATCAATGCTTGCTTCCAGTTGATAAATCGTTAGATTACAAAAGTCAGATTGCTACCGAGGAAGAGGTGATTCTGGACAACAACTTAGTCACACCAAAATTGATAGTTGATGCAGATAAAATTAAGATGATAGGTGTGCAGCCATGTTCTTCTAAGGAAATTTTATACAGGCAAAATTCCAGGACAGGGGAAGACAATGATGTTGCCCAGCCACCTGTGTCAGGCGCTACTCAGTCAAATATTGTAAATCATCACAAGAATGATTCGACATCATCTACATCTTCACCATCTTTCATGTTTGGTGATATACAGGATTCTCCAAACTCAGTTTTCGGCAATCAGGATCCTTGGAGTATACCACACGGAACCTACAAGAAATCTAATTTGGATGCACAGCTGGATGGTGACTTCTGCGATTCATTCAAACAGAATTTAACTTTTGAAAATGGTTGGTGTGACAAAGTTTCAACCGAAGACCAACAACTTAAAGTTGTTGCTGAAGATGTAGCAGCTTCTGTTCTGCACCCATGTGCTCCTTCAAATCCTATATTGCAAGTCGGAGATCTTTCCTGTCACAAAAACACTGAGGACGGTGATGTTCAAAATAATGCAATAGATGCAATGTGTAGAGATATAACTCAGGATGTCAAGAGCAACTCTCCAGAGAAGGGAAATTTTGGCTTTCCGACATCGGGTGTTGGACGTTTGCAGATTATAAAGAACTGTGACCTTGAAGAGCTGACAGAGTTGGGTTCTGGTACCTTTGGGACTGTTTATCATGGAAAATGGAGGGGAACCGATGTTGCAATCAAGAGAATAACTGATAGATGTTTTGCTGGGAAGCCTTCAGAGCAAGAGCGCATGAGAGACGATTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCATCCAAATGTAGTTGCTTTCTATGGCGTGGTGCTTGATGGACCAGGAGATTCGGTGGCAACAGTAACTGAGTATATGGCTAATGGTTCTCTTAGAACTGCCTTGCAAAAGAATGAGAGGAATCTAGACAAGCGCAGACGTCTTATGATTGCAATGGATGTGGCCTTTGGAATGGAATACCTGCATGGAAAAAACATAGTACACTTTGACTTGAAAAGTGACAACTTGCTAGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTAGGTCTATCCAAAGTAAAATGTCAGACTCTGATCTCTGGAGGTGTGAGAGGAACTCTACCATGGATGGCACCAGAACTGCTGAATGGAAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTCTCATTCGGTATCGTGATGTGGGAACTCTTAACCGGAGAAGAGCCATACGCTGATTTGCACTATGGTGCTATTATAGGTGGTATTGTGAGCAACACTTTGCGCCCTCCAATTCCCGAATCTTGTGACGTGGAATGGAGCGTGTTGATGGAGAGATGTTGGTCCTCAGAGCCATCAGAGAGACCCACCTTCACTGACATTGCTGATGAATTACGTTCTATGGCAAGCAAACGCCAGAATCAACAACTACAACCCTCTCCTTTGTCTACACAAGTCAACAAATGA 4041 0.4363 MAFDQNSAPTDLRVLNVAPIMVEEPLISPASVTTPPTPDSVSDYFYPTAGSSAGATSATWCVRPIVSPPSIYGNRVVAGNALNLGNWVGANSSNNNNNTGLHNVCNDGVPVTVSGFSYAAHGGTGTGPGTRVVDDTGDDSNSGRKVKFLCSFGGKILPRPNDGVLRYVGGQTRIISVKKDVSYNDLVLKMVDTYGQPVVIKYQLPEEDLDALVSVSCPDDVENMMEEYGKLVERSPDGSAKLRVFLFPLSEVDLSGAVQSADLQDTGQKYFDAVNGFIDGYGVCCGLKKKESVTSAASTQNSDLSGIETIDSSVAGQGDSASCVLSPREYVAASPDTGVSLVNSESSPPVYSGASSGVSFGMPAGKTGPTYTSYPQNEVELEKSVPVTFSQQPFELHQSGMEIPPSSPYSNHAEYVHLPPQMGFPNPQLLGKTGPVFAQQQFHNNNNTPGLAFRQVIPGAQMTMTQPSSRVGIRPNVIQPQPLIQPQHNHLNQYNNENTSGIRIVQLPAEHSYNTYQVPVNQVPVNQVPSVIVGGNRGWVQVPPQEHVVFSDGSLPQQVIIPEKIQRVEECSMCQKKLPHAHSDPVVPDQHDGGSGPVPDSIPCYNSFPMEDNVKAQATKRVEPMMALPLKEGVVEQGFTTKPSVISKLEVHNGVRHCTDNTGISYNFEPQHEGRKIFIQNPEEFDHSMNSLIQETIGRTDGKHSSRDGHGSTGATPPSYPDDIVRQHMAPVETWVKQDEHANKHVNSDIPIVDGTTLHTPECVAQGSSKEYTNEPTGVVSKSDAVNNWIRQGYVSPVDGRNDILKIHNADGYVSNDQCLLPVDKSLDYKSQIATEEEVILDNNLVTPKLIVDADKIKMIGVQPCSSKEILYRQNSRTGEDNDVAQPPVSGATQSNIVNHHKNDSTSSTSSPSFMFGDIQDSPNSVFGNQDPWSIPHGTYKKSNLDAQLDGDFCDSFKQNLTFENGWCDKVSTEDQQLKVVAEDVAASVLHPCAPSNPILQVGDLSCHKNTEDGDVQNNAIDAMCRDITQDVKSNSPEKGNFGFPTSGVGRLQIIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGDSVATVTEYMANGSLRTALQKNERNLDKRRRLMIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPPIPESCDVEWSVLMERCWSSEPSERPTFTDIADELRSMASKRQNQQLQPSPLSTQVNK 1346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01415 1346 PRINTS Tyrosine kinase catalytic domain signature 1250 1272 IPR001245 GO:0004672|GO:0006468
Vivi1g01415 1346 PRINTS Tyrosine kinase catalytic domain signature 1294 1316 IPR001245 GO:0004672|GO:0006468
Vivi1g01415 1346 PRINTS Tyrosine kinase catalytic domain signature 1179 1197 IPR001245 GO:0004672|GO:0006468
Vivi1g01415 1346 PRINTS Tyrosine kinase catalytic domain signature 1142 1155 IPR001245 GO:0004672|GO:0006468
Vivi1g01415 1346 SUPERFAMILY Protein kinase-like (PK-like) 1052 1321 IPR011009 -
Vivi1g01415 1346 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 165 249 - -
Vivi1g01415 1346 MobiDBLite consensus disorder prediction 1327 1346 - -
Vivi1g01415 1346 ProSitePatterns Protein kinases ATP-binding region signature. 1066 1097 IPR017441 GO:0005524
Vivi1g01415 1346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1185 1197 IPR008271 GO:0004672|GO:0006468
Vivi1g01415 1346 SUPERFAMILY CAD & PB1 domains 161 251 - -
Vivi1g01415 1346 Gene3D Transferase(Phosphotransferase) domain 1 1147 1345 - -
Vivi1g01415 1346 PANTHER SERINE-THREONINE PROTEIN KINASE 212 1325 - -
Vivi1g01415 1346 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1053 1147 - -
Vivi1g01415 1346 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1148 1338 - -
Vivi1g01415 1346 ProSiteProfiles Protein kinase domain profile. 1060 1327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01415 1346 MobiDBLite consensus disorder prediction 876 932 - -
Vivi1g01415 1346 MobiDBLite consensus disorder prediction 698 722 - -
Vivi1g01415 1346 SMART PB1_new 160 249 IPR000270 GO:0005515
Vivi1g01415 1346 Pfam PB1 domain 165 248 IPR000270 GO:0005515
Vivi1g01415 1346 Gene3D Phosphorylase Kinase; domain 1 1054 1146 - -
Vivi1g01415 1346 CDD PB1_UP2 149 247 - -
Vivi1g01415 1346 CDD STKc_MAP3K-like 1066 1323 - -
Vivi1g01415 1346 SMART serkin_6 1060 1326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01415 1346 Gene3D - 166 248 - -
Vivi1g01415 1346 Pfam Protein tyrosine and serine/threonine kinase 1063 1323 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01415 Vivi-Chr1 29425624 29431351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01415 139 621 MAP Kinase Kinase Kinase AT3G46920 39.069 1.17e-78 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Vivi1g01415 PK_Tyr_Ser-Thr 4.4e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01415 - - mtr:11439273 2134.38