Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01395 ATGATATACAAGTTGAAGATATATTTATCCTCGTCTGAAGAAGATGTTGATGAAGATTCTTATGACTTAATAGTATTTCGTTATCTCACAATTAAAGTAGCAACAAATAACTTCTCAAAAGAAAATAAGCTTGGAGAAGGTGGATTTGGTACAGTGTACAAGGGAAAATTACGCAAAGGACAGGAAATAGCTGTCAAAAGACTCTCAAAAACCTCAAATCAAGGACTTGAAGAGTTCAAAAATGAGATTACGCTCACCGCAAGACTACAACATGTAAATTTAGTCAGACTTTTTGGTTACTGCACAAAAAGGAATGAGAAGCTTCTTGTCTACGAATACCTCCCAAATAAAAGCTTAGATCATTTTCTCTTTGATCCAAGGAAATCAAGTCTTCTAGATTGGAAGAAACGCGTGAATATCATTGAAGGGATTACTCAAGGCCTTCTGTATCTCCAAGAGTACTCAAATTTTACTATAATCCACCGAGATCTTAAAGCTAGTAATGTTTTGTTAGACCATCAGATGAATCCTAAGATATCTGATTTTGGACTTGCTAGAATTTTTGAAAAGAATGAACTTGAAGCAAATACAAGTAGGATTGTGGGAACATAG 612 0.3448 MIYKLKIYLSSSEEDVDEDSYDLIVFRYLTIKVATNNFSKENKLGEGGFGTVYKGKLRKGQEIAVKRLSKTSNQGLEEFKNEITLTARLQHVNLVRLFGYCTKRNEKLLVYEYLPNKSLDHFLFDPRKSSLLDWKKRVNIIEGITQGLLYLQEYSNFTIIHRDLKASNVLLDHQMNPKISDFGLARIFEKNELEANTSRIVGT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01395 203 Gene3D Transferase(Phosphotransferase) domain 1 114 203 - -
Vivi1g01395 203 FunFam Uncharacterized protein 13 113 - -
Vivi1g01395 203 Pfam Protein kinase domain 38 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01395 203 ProSiteProfiles Protein kinase domain profile. 38 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01395 203 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 114 203 - -
Vivi1g01395 203 SMART serkin_6 38 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01395 203 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 203 - -
Vivi1g01395 203 Gene3D Phosphorylase Kinase; domain 1 12 113 - -
Vivi1g01395 203 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
Vivi1g01395 203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Vivi1g01395 203 SUPERFAMILY Protein kinase-like (PK-like) 20 203 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01395 Vivi-Chr1 29076678 29077959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01395 6 203 Receptor kinase-like Gene Family AT4G23290 60.697 2.58e-79 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi1g01395 Pkinase 2.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01395 - - psat:127073424 354.369