Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01347 ATGCCTCCTGATCAGAGAAAAAAGTCATCTATAGATGTAGATTTCTTTACTGAATATGGTGAAGGGAGTAGATACATGATAGAGGAAGTGATTGGTAAAGGAAGTTACGGAGTGGTTTGTTCCGCGTATGATACACATACTGGAGAGAAGGTTGCAATAAAGAAAATTACTGATATATTCGAACATGTTTCTGATGCTACTCGCATTCTTAGGGAGATTAAGCTTCTTAGATTGCTAAGGCATCCTGATATTGTGGATATTAAACATATTTTGTTACCGCCTTCTAGAAGGGAGTTTAAGGATATATATGTAGTTTTTGAACTTATGGAGTCGGATTTGCATCAAGTTATTAAAGCGAATGATGATTTGACGCCGGAGCATTATCAGTTTTTTCTTTATCAGCTTCTTCGGGGATTGAAGTATATACACACAGCTAATGTTTTTCATCGTGATCTAAAGCCGAAGAACATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGCGATTTCGGTCTTGCTAGAGTAGCTTTCAATGATACACCCACTGCTATATTTTGGACAGATTATATTGCGACAAGGTGGTATAGGGCTCCTGAGTTGTGTGGATCCTTTTTCTCCAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTCGCCGAACTTTTAACTGGAAAGCCTCTTTTCCCCGGGAAGAATGTTGTCCATCAATTGGACCTCATGACCGACTTCCTTGGAACACCATCTCCTGAAGCCATTGCTAGGATACGAAACGAAAAAGCTCGGAGATATTTGAGCAGCATGCGTAAGAAGAAGCCAGTTCCTTTGTATCAAAAGTTTCCTAATGCAGATCCCCTTGCTCTCCGTGTGTTAGAGAGAATGTTGGCATTTGATCCTAAGGATCGACCTACTGCTGAAGAGGCTCTAGCGGATCCATATTTTAAGGGCTTGGCTAAGTTTGAGAGAGAGCCTTGTGCTCAGCCAGTTAGCAAGATGGAATTTGAATTTGAGAGACGCAGGGTTACAAAGGAAGACGTGCGAGAGCTTATATACAGAGAGATTCTGGAGTACCATCCGAAGATGTTAAAGGAACATCTAGAAGGAGCAGAGCCAACTGGATTCATGTATCCAAGTGCTGTGGACCACTTCAAAAAACAATTTGCATACCTCGAGGAGCATTATGGGAAAGGTGGTACTATAAGTCCACTCGACAGACAACATGCATCATTGCCCAGGCAGCGTATGATGTATTCAGACGACTCTAGACAGAATATGGCTGAGGTTGCAGCAGATGATCTCTCCAAGTGCAGCATCAAAGAAGTTGAGAAGACCGCCGTTGATAGGACCAGTGGTGTTGCAATGAACAGGCTTCCTTTACAAGCTCCTCAAAGTATTCAAGATGTCATGACTAATAGAAATGTTGCCCCACGCCCCAGAAAAGATGCGGGTTCCGTATTGCATTACAATTGTGGTGTAGCAGGGGCTGACCAACGGAAGACGGTTAGAAATCCATCTGTTTCTTCTCAGTATGCTGCTTCAAGCCGTTCATATCCCAAAAGAAATCCAAGCTGTAAAAACGAGAGAGCAGAAGACGGGATTGAAGGTTCTAACGGGCTTCAGACGAAACCTCAATACATAGCACGAAAAGTTGCTGCTGCTCCAAGTGGAACTGGCAGTAACTGGTAG 1692 0.4267 MPPDQRKKSSIDVDFFTEYGEGSRYMIEEVIGKGSYGVVCSAYDTHTGEKVAIKKITDIFEHVSDATRILREIKLLRLLRHPDIVDIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYIATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARIRNEKARRYLSSMRKKKPVPLYQKFPNADPLALRVLERMLAFDPKDRPTAEEALADPYFKGLAKFEREPCAQPVSKMEFEFERRRVTKEDVRELIYREILEYHPKMLKEHLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTISPLDRQHASLPRQRMMYSDDSRQNMAEVAADDLSKCSIKEVEKTAVDRTSGVAMNRLPLQAPQSIQDVMTNRNVAPRPRKDAGSVLHYNCGVAGADQRKTVRNPSVSSQYAASSRSYPKRNPSCKNERAEDGIEGSNGLQTKPQYIARKVAAAPSGTGSNW 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01347 563 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01347 563 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Vivi1g01347 563 FunFam Mitogen-activated protein kinase 111 339 - -
Vivi1g01347 563 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Vivi1g01347 563 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 361 - -
Vivi1g01347 563 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01347 563 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g01347 563 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Vivi1g01347 563 MobiDBLite consensus disorder prediction 498 563 - -
Vivi1g01347 563 CDD STKc_TDY_MAPK 24 361 - -
Vivi1g01347 563 MobiDBLite consensus disorder prediction 502 522 - -
Vivi1g01347 563 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Vivi1g01347 563 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Vivi1g01347 563 FunFam Mitogen-activated protein kinase 15 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01347 Vivi-Chr1 28076660 28081101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01347 1 563 MAP Kinase Gene Family AT5G19010 74.784 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Vivi1g01347 Pkinase 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01347 - - gmx:100799442 977.622