Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01270 ATGGACAAAAGATTTGGTTTTATTTCTAAGGCTAGTGCGGCGGCTTGTGTGGATCAACAACAACAATGCTCTGTTCCTTTGATTTATCCTTTGTGGATTGGAAACAAATTAAACTTTCAACAGTTGATATCCTCCTATCATTTGGCACTGACCAAGTTTGATTTAAAACAAGATCAACGTGTCTTGCTAGTGGTAAATTTGAAATCTTTCATGAAGCTCAAGACGTGGCCAGTTGAATTAAACTACAAATTCATGTTTTTGGCGCGGGTTTTTGGATATGCTGGGATTTACTATAGCTCTTCAACACTTGCTACAACCATGCTCAATCTTATTCCTGATTTTACCTTCATACTTGTCATTCTATTTAGAATGAAACAATTAGATTGGAAAAGCTATAGTAGCCTAGCAAAATCATTGGGAACAATAGTATCAATTGTCGGTGCTTTTATTGCGACTTTGTACAAGGGTGCTGCACTTTTGAAGGGACCATCATCACCTGCAAACTTATCTCATCGGCTAGCTTTTTCACAGGATACTAGTTGGATGACCGGAGGATCATTTTTAGTAGCTGATTGCATGGTGGCTTCAGCATTTCTAACATTACAAGCTTAA 612 0.3775 MDKRFGFISKASAAACVDQQQQCSVPLIYPLWIGNKLNFQQLISSYHLALTKFDLKQDQRVLLVVNLKSFMKLKTWPVELNYKFMFLARVFGYAGIYYSSSTLATTMLNLIPDFTFILVILFRMKQLDWKSYSSLAKSLGTIVSIVGAFIATLYKGAALLKGPSSPANLSHRLAFSQDTSWMTGGSFLVADCMVASAFLTLQA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01270 203 PANTHER WAT1-RELATED PROTEIN 84 203 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01270 Vivi-Chr1 26620953 26622504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01270 88 191 Nodulin-like Gene Family AT3G28050 46.154 2.53e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01270 - - vvo:131631983 402.134