Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01225 ATGCAGAACGTTCACGGTGTTCATGTCAATGTTGTAAACTCAATTGACGGTCTTTTTAATAAAATTCATGTCAATATTGTTAATTCTTTAGAAGGCAATTTAGATTTAAATCTTCATTGTAAATCTAAAGATGACGATCTTGGAGATCATCTTTTACATCATGGTGAAAGATTTAGTTTTAGTTTCCGTCCTAAATGGTTTGCTAAAACCTTATTCTTTTGTTCCTTTGTATGGAATGGTGAATTACATTGGTTTGATATATTTATAGATTGGGACATGCCGAGAGCAGATTGTCATAGTTGCAATTGGAATGTATACAAATCTGGACCATGTAGAACTCCAGAGTTGCCTACAGATAAACCTATTTGCCTTCCGTGGAATAAGCCACAATGA 393 0.3384 MQNVHGVHVNVVNSIDGLFNKIHVNIVNSLEGNLDLNLHCKSKDDDLGDHLLHHGERFSFSFRPKWFAKTLFFCSFVWNGELHWFDIFIDWDMPRADCHSCNWNVYKSGPCRTPELPTDKPICLPWNKPQ 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01225 130 PANTHER - 20 112 IPR010264 -
Vivi1g01225 130 Pfam Plant self-incompatibility protein S1 23 126 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01225 Vivi-Chr1 25891488 25891880 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01225 21 127 Carbohydrate Esterase AT3G16970 45.455 1.10e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01225 - - vvo:131595887 280.796