Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01217 ATGTCTCCATTTAACCAAAAAGTTGTGGTGATATGTATGTTGATGCTGTTATCAGTGCAGTATGTTCACAGCGTTCAAGTGAATGCTTTAAACTCAATTGACGGTCTTTTTAATAAAATTCATGTCAATATTGCTAACTCTTTAGAAGGAAATTTAGATTTAACTCTTAATTGTAAATCAAAAGATGACAATCTTGGAGTTCATCTTTTGCATCATGGCGAAACTTTTAGTTTTACTTTCCGTCCTAAATGGTTTGCAAAAACCTTATTCTTTTGTTCCTTTGCATGGACGGGTGAATTTCATTGGTTTGATATATTTATAGATTGGGACAGGCCGAGAGCTGATTGTCATAATTGCAATTGGAATGTATACAAATCTGGACCATGTAGAACTCCAGAATCAAAGTCGCATACACCTACACCTATTTGCTTTCCGTGGAATAAGCCACAATGA 453 0.3488 MSPFNQKVVVICMLMLLSVQYVHSVQVNALNSIDGLFNKIHVNIANSLEGNLDLTLNCKSKDDNLGVHLLHHGETFSFTFRPKWFAKTLFFCSFAWTGEFHWFDIFIDWDRPRADCHNCNWNVYKSGPCRTPESKSHTPTPICFPWNKPQ 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01217 150 Pfam Plant self-incompatibility protein S1 41 146 IPR010264 -
Vivi1g01217 150 PANTHER - 38 131 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01217 Vivi-Chr1 25677851 25678303 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01217 11 147 Carbohydrate Esterase AT3G16970 37.857 1.96e-24 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01217 - - vvo:131595887 242.662