Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01215 ATGTCTCCATTTAACCAAAAAGTTGTGGTGATATGTATGTTGATGCTGTTATCCATGCAGTACGTTCACGGTGTTCATGTGAATGTTGTTAACTCAACTGGAAATCTTTTTAGAGTTCATGTCAATGTTGTTAACTCTTTAGAAGACAATTTAGACTTAACTCTTCATTGTAAATCTAAAGATGACGATCTCGGAGTTCATCTTTTGCATCATGGTGAAGGCTTTAGTTTCAGTTTCCGTCCTGCATATATTATTGCTCAAACATTATTCTTTTGTTCCTTTGCATGGAAGGATGAATTACATTGGTTTGATATATACATAGATGGTGATAAGGCGAGAGCTGATTGTGATAATTGCAATTGGAAAGTATTCAAATCTGGACCATGTAGAACTCCAGAACCAAAGTCGCCTACACCTACACCTATTTGTCTTCCATGGAATAAATCACAAAGAGTGTAG 459 0.3595 MSPFNQKVVVICMLMLLSMQYVHGVHVNVVNSTGNLFRVHVNVVNSLEDNLDLTLHCKSKDDDLGVHLLHHGEGFSFSFRPAYIIAQTLFFCSFAWKDELHWFDIYIDGDKARADCDNCNWKVFKSGPCRTPEPKSPTPTPICLPWNKSQRV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01215 152 Pfam Plant self-incompatibility protein S1 40 146 IPR010264 -
Vivi1g01215 152 PANTHER - 39 130 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01215 Vivi-Chr1 25656486 25657037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01215 38 147 Carbohydrate Esterase AT3G16970 45.133 1.13e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01215 - - psat:127136024 289.656