Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01198 ATGATGCTGAAATTCTTCACCACCACCACCACTACTCTTACCTCATCAAAAACCATTTTCAAATTCTTCTCCACTTCCACCACAAACCCACAATCCTTCACCGTCTCCTACCTCATCAACAACTGCGGCTTCTCCCCAGAAACCGCCTCCAAAGCTTCCCAAACTCTCACTCTCACCAACTCCCAAAAACCCGATTCAATTCTCGCCTTCTTCACTACCCACGGCTTCTCCATCTCACAACTCCGCGACATCATCAGACGTGAACCCTGGCTACTCTCATGCGACCCCAACAAGGTACTTTTACCAAAGTTTCAATTTTTACTCTCCAAGGGCGCTTCTTCCTCTGATATCATTCGTATCGTTAATGCAAGCCCTAGACTCCTTAGAAGAAGCTTAGAGAATCATATAGTTCCTGCTTATGAATGTGCAAAAGGGTTTCTTCAATCTGACAAAAAAACCATTGCTTGTGTTAAGCGTTTTTGTTTTCTCTGTCAAAGTGGTGTGGCAGAAAATGTTAAAGTCTTGCTTGATAATGGAGTTTCTCACTCAAATATTGCTAGGTTGTTTCATTGGTGGCCTAGTATAATTTGCTCTTTTGATTTGTTGAACACTGTTGAAGAACTGAAAGAACTCGGTTTCGATGGGTCGACTTCGGCTTTTAGTAAGGCGTTTCTTGCGAAGAGAAGTGTTACGAAAGCGAAGTGGGATGAGAAAGTTGAAACCTTTAAGAAATGGGGTTGGTCTGATGAACTGATTATTGAAACGTTTAAGAAGCATCCTTTCTGTATGCTGGTATCGCCTCGCAAGATCAATGCGATTATGGATTTTTGGGTTCATCGCTTAGGTTTGGATTCTTTGGAACTTGCTAGAGCTCCTGGGATTCTTCAATGCAGTCTTGAGAAGAGGATTATTCCTAGAGCTTCTGTTGTGCAGTTTCTTATCTCGAATGGCTTGCGACGAAAGGATGCGGGTGTGTATACGCCGTTTGTTGTATCTGAGAAGTTGTTTGTGGAGAAGTTTGTGAAAGGTTTCGAGGAGCATTCTTCTGATCTCATAAAGCTTTATGAGGAGAAACTGAATCTTGCAGATGGTACGAACAGCCTTCTGCTGGTGTGA 1116 0.4283 MMLKFFTTTTTTLTSSKTIFKFFSTSTTNPQSFTVSYLINNCGFSPETASKASQTLTLTNSQKPDSILAFFTTHGFSISQLRDIIRREPWLLSCDPNKVLLPKFQFLLSKGASSSDIIRIVNASPRLLRRSLENHIVPAYECAKGFLQSDKKTIACVKRFCFLCQSGVAENVKVLLDNGVSHSNIARLFHWWPSIICSFDLLNTVEELKELGFDGSTSAFSKAFLAKRSVTKAKWDEKVETFKKWGWSDELIIETFKKHPFCMLVSPRKINAIMDFWVHRLGLDSLELARAPGILQCSLEKRIIPRASVVQFLISNGLRRKDAGVYTPFVVSEKLFVEKFVKGFEEHSSDLIKLYEEKLNLADGTNSLLLV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01198 371 Pfam mTERF 68 214 IPR003690 GO:0003690|GO:0006355
Vivi1g01198 371 Pfam mTERF 168 321 IPR003690 GO:0003690|GO:0006355
Vivi1g01198 371 PANTHER CGI-12 PROTEIN-RELATED 31 343 IPR003690 GO:0003690|GO:0006355
Vivi1g01198 371 SMART mt_12 285 319 IPR003690 GO:0003690|GO:0006355
Vivi1g01198 371 SMART mt_12 186 214 IPR003690 GO:0003690|GO:0006355
Vivi1g01198 371 SMART mt_12 253 284 IPR003690 GO:0003690|GO:0006355
Vivi1g01198 371 SMART mt_12 82 113 IPR003690 GO:0003690|GO:0006355
Vivi1g01198 371 SMART mt_12 118 149 IPR003690 GO:0003690|GO:0006355
Vivi1g01198 371 Gene3D Transcription termination factor 3, mitochondrial 154 349 IPR038538 -
Vivi1g01198 371 FunFam Mitochondrial transcription termination factor-like 132 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01198 Vivi-Chr1 25167071 25168186 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi1g01198 mTERF 2.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01198 K15031 - gmx:102667698 374.015