Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01195 ATGTTTCATTCACACCGTCTCAGAGCTCTTGTCTACCTCAACCATCTCTCTTCATCTCCAAAATCTCACTACCTTCTTCACTCTCTCACTCCCTTCTCCACCACTTCAGATTCCGACCAAAAATCTTTCACCATATCCTACCTCACCAACAACTGCGGCTTATCCCCACAAGACGCTCTCAAAGCATCCAAACGACTCCGTTTAACTTTCACCACCCCCGAAAAACCCAACTCCGTCATCGCCTTCTTCAAAGCCCACGGTTTCTCCAACCACCACATCCAGTCCATCATCCTCAAGAACCCCGAGCTCATCCTCTCCAACCCCACCAAAACCATTCTCCCAAAGTTTCAATTTTTAGCCTCCAAAGGCGCTTCCCCCTCCGACATAGTCGCCGCCGTCACCAGAAGCTCTCGTTTCCTCCGTGTAAGCCTCGAGAAACACATTATCCCCGCTTTTGAATTGGTACGAGGTTTCTGTCCCTCTGATAAAAAAGCTATTACTTCAATCATCATTTGTCCGGCTTCAATCAGTGATATTCGCATGAAACCTAATGTTCAGTTTTTACTCAATTTTGGGGTTAATCATTCTAGTATTTACCATTTGCTTAGTACTAGACCTTCTGTGATTTGTTCTACTGATTTGAGGGAGGTTGCGGAGGAGATTAAGGGATTAGGGTTTCATCCTTCAAAATACAATTTTTGTGTGGCATTATTAGCCAAAAGGGGTATTACTAAATCCCAATGGGATGCCAAAGTTGATGTCTTGAAGAAATGGGGTTGGTCCCAAGATGAGATTTTGCATGCATTTAAAAAGAACCCTAAGATTATGCTACGGTCTGCGGAGAAACTCAACGCGGTCATGAGTTTTTGGATCAAGCAGCTTGGTTGGGATCCTGCAGTGCTCTTGGCAGCGCCGGATCTATTTGGATTTAGTCTAGAGAAAAGGCTTATTCCGAGGGCTTCTGTTGTCCGGTATCTGTTATCTAAAGGTTTGGTGAAGAAGAGTGCTAGTTTGTATACGCCGTTTAATTTCTCGGACGAGTTGTTCATGAAAAAGTATGTGAATTGTTATGAGGAAGAAGCTTCTAAGCTATTAAGGCTATATCAGGGGAAGGATGCTAGTTTATAG 1128 0.4397 MFHSHRLRALVYLNHLSSSPKSHYLLHSLTPFSTTSDSDQKSFTISYLTNNCGLSPQDALKASKRLRLTFTTPEKPNSVIAFFKAHGFSNHHIQSIILKNPELILSNPTKTILPKFQFLASKGASPSDIVAAVTRSSRFLRVSLEKHIIPAFELVRGFCPSDKKAITSIIICPASISDIRMKPNVQFLLNFGVNHSSIYHLLSTRPSVICSTDLREVAEEIKGLGFHPSKYNFCVALLAKRGITKSQWDAKVDVLKKWGWSQDEILHAFKKNPKIMLRSAEKLNAVMSFWIKQLGWDPAVLLAAPDLFGFSLEKRLIPRASVVRYLLSKGLVKKSASLYTPFNFSDELFMKKYVNCYEEEASKLLRLYQGKDASL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01195 375 PANTHER CGI-12 PROTEIN-RELATED 40 360 IPR003690 GO:0003690|GO:0006355
Vivi1g01195 375 Gene3D Transcription termination factor 3, mitochondrial 175 367 IPR038538 -
Vivi1g01195 375 Gene3D Transcription termination factor 3, mitochondrial 51 174 IPR038538 -
Vivi1g01195 375 Pfam mTERF 81 276 IPR003690 GO:0003690|GO:0006355
Vivi1g01195 375 Pfam mTERF 247 349 IPR003690 GO:0003690|GO:0006355
Vivi1g01195 375 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Vivi1g01195 375 SMART mt_12 130 159 IPR003690 GO:0003690|GO:0006355
Vivi1g01195 375 SMART mt_12 167 194 IPR003690 GO:0003690|GO:0006355
Vivi1g01195 375 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Vivi1g01195 375 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Vivi1g01195 375 FunFam Mitochondrial transcription termination factor-like 144 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01195 Vivi-Chr1 25143691 25146151 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi1g01195 mTERF 1.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01195 K15031 - gmx:102666739 342.428