Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01194 ATGAAACCAAATCTTCAATTTTTACTCGATTCCGGTGTCACTCGTTCAAGCATTTACCATTTGCTTAGTTCTAGACCTTCTGTAATTTGTTCTACTGATTTGAGAAAGGCTGTGGAGGAGATTAACGAATTAGGGTTTCATCCTTTAAAGTACAATTTTTGTGTGGCGTTACTTGCCAAGAGGGGTATCTCTAAATCACTATGGGATGCTAAAGTTGATGCCTTGAAGAGTTGGGGTTGTTCTGAAGATGTCATTTTTGATGCCTTTAAAAGACAGCATAACTTTATGCTACGGTCACCGGATAAGCTCAATGCGGTGATGCAATTTTGGGTCAAAGAGCTTGAATGGGATCCTTCAGCGCTCTTGGCAGCACCTGACCTATTCGGATTTAGTCTAGAGAAAAGGCTTGTTCCAAGGGCTTCAGTCGTCCGGTATCTTTTATCCAAAGGTTTGATTAAGAAGAGTGCTAGCTTGTATACACCGTTTAGTTTGTCTGATGAGTTGTCCGTGAAAAAGTATGTGGATTGTTATGAGGATGAAGCATATAGGCTATTAAGGCTATATCAGGGGGAGGATACTAGCATACAATGCTCGGATAAGTTGTGA 606 0.4076 MKPNLQFLLDSGVTRSSIYHLLSSRPSVICSTDLRKAVEEINELGFHPLKYNFCVALLAKRGISKSLWDAKVDALKSWGCSEDVIFDAFKRQHNFMLRSPDKLNAVMQFWVKELEWDPSALLAAPDLFGFSLEKRLVPRASVVRYLLSKGLIKKSASLYTPFSLSDELSVKKYVDCYEDEAYRLLRLYQGEDTSIQCSDKL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01194 201 Gene3D Transcription termination factor 3, mitochondrial 1 186 IPR038538 -
Vivi1g01194 201 Pfam mTERF 1 167 IPR003690 GO:0003690|GO:0006355
Vivi1g01194 201 PANTHER CGI-12 PROTEIN-RELATED 1 180 IPR003690 GO:0003690|GO:0006355
Vivi1g01194 201 FunFam Mitochondrial transcription termination factor-like 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01194 Vivi-Chr1 25138282 25138887 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi1g01194 mTERF 6.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01194 K15031 - gmx:102666739 196.438