Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01193 ATGTTGCATCACAGAGATTTTCCATACCTCCACAAACTTCCTTCAACCCCAAAATGTCATTTTCTTCTTCTCAAACTCAAACCCCACTCTTTCAACTTCTTCTCCGCCGCCGCCGCCACTACTTCAGATTCAGATAAAAAATGTTTCACCATATCCTACCTCACTAACAATTGTGGTTTGTCTCCACAAGATGCTCTCAAAGTATCCAAACGATTTACTTTCGAAACCCCCGAAAAACCCAATTCCGTCATCACCTTCTTCAAAACCCAAGGCTTCTCCGATGACCAGATACAATCCATTATTCGCAGGAATCCTCAGCTCATCGTTTCCAGCCCCATCAAAACCATTCTCTTAAAGTTTCAATTTTTAGCCTCCAAAAGGGCTTCCCCTTCCGACATAGTCGCCACCGTCACAAGAAGCTCTCGTTTCCTTCGTGCAAGTCTTCACCAACACATTATCCCTGCTTTTGAATTGGTAACAACTTTCTGTCCCCTGATCAAAAAGCTATTACTTCAATGGGATGCCAAAATTGATGCATTCAAGTGCTGGGGTTGCTCTGAAGATGAAATTTTCAATGCATTTAAAAGGAACCCTAAGATTATGCTACGGTCTTCAGATAAACTCAACGCGGTCATGAGTTTTTGGATCAAACAGCTTGGTTGGGACCCTTCAGCGCTCATGGCAGCACTGAATCTTTTTGAATTTAGTCTAGAGAAAAGGCTTATTCCAAGAGCTTTAGTCGTCCAGTATCTTTTATCCAAAGGTTTGATGAAGAAGAGTGCTAGCTTGCGTACACCGTTTGGTTTGTCTGATGAGTTGTTCATGAAAAAGTATGTGGATTGTTATGAGGATGAAGCATCTAGGCTATTAAGGCTATATCAGGGGGAGGATACTAGCATACAATGCTCGGATAAGTTGTGA 921 0.4213 MLHHRDFPYLHKLPSTPKCHFLLLKLKPHSFNFFSAAAATTSDSDKKCFTISYLTNNCGLSPQDALKVSKRFTFETPEKPNSVITFFKTQGFSDDQIQSIIRRNPQLIVSSPIKTILLKFQFLASKRASPSDIVATVTRSSRFLRASLHQHIIPAFELVTTFCPLIKKLLLQWDAKIDAFKCWGCSEDEIFNAFKRNPKIMLRSSDKLNAVMSFWIKQLGWDPSALMAALNLFEFSLEKRLIPRALVVQYLLSKGLMKKSASLRTPFGLSDELFMKKYVDCYEDEASRLLRLYQGEDTSIQCSDKL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01193 306 Gene3D Transcription termination factor 3, mitochondrial 62 292 IPR038538 -
Vivi1g01193 306 SMART mt_12 191 222 IPR003690 GO:0003690|GO:0006355
Vivi1g01193 306 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Vivi1g01193 306 SMART mt_12 223 257 IPR003690 GO:0003690|GO:0006355
Vivi1g01193 306 PANTHER CGI-12 PROTEIN-RELATED 172 285 IPR003690 GO:0003690|GO:0006355
Vivi1g01193 306 Pfam mTERF 175 274 IPR003690 GO:0003690|GO:0006355
Vivi1g01193 306 Pfam mTERF 85 154 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01193 Vivi-Chr1 25127846 25129450 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi1g01193 mTERF 1.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01193 K15031 - gmx:100792944 230.335