Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01185 ATGGTGAAGTTTACAGCTGATGAGTTACGTCGTATTATGGACTACAAGCACAACATCAGGAACATGTCTGTCATTGCTCATGTTGATCACGGAAAATCAACTTTGAAATATTCTTGTGCTGCTGCTGCTGTAATTATAGCACAAGAGGTCGCTGGAGATGTCAGGATGACACATACTCGTGCTGATGAAGCTGAGCGTGGTATCACTATTAAGTCTGCTGTATCAACAAATGTTAAGTTTGTAATGTCAAGTTTGCTCTAG 261 0.4061 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLKYSCAAAAVIIAQEVAGDVRMTHTRADEAERGITIKSAVSTNVKFVMSSLL 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01185 86 Pfam Elongation factor Tu GTP binding domain 17 75 IPR000795 GO:0003924|GO:0005525
Vivi1g01185 86 PRINTS GTP-binding elongation factor signature 21 34 IPR000795 GO:0003924|GO:0005525
Vivi1g01185 86 PRINTS GTP-binding elongation factor signature 65 73 IPR000795 GO:0003924|GO:0005525
Vivi1g01185 86 Gene3D - 3 84 IPR027417 -
Vivi1g01185 86 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 7 75 - -
Vivi1g01185 86 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 77 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01185 Vivi-Chr1 24792268 24793915 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01185 1 72 Eukaryotic Initiation Factors Gene Family AT1G56070 91.667 4.39e-38 132