Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01169 ATGCCCCTCTTGTGTTTCAATGTTGACACATATTCTCCACTTCTTGGTTCACACGACCAAAACATTTTTTCTCTATGCTCTCTTCACCTTTGTGATTTGCTAAGTCACACTCCCACTCTCTCTCCCTTTCTATATAAACTCACAATTTCTCTTCTCTCTTTCTGTATAGCTTGCCACATTCTGAATTCAACAATTCTTTTATCCTACTTTGTCTTCACTTCATCATCATCATCTCATCTTAGGCTAATAACTGAGGAGAGAAACATGCTTAGTCCTGAAGGAGAAATTAAAATAACTTTTGGTTACAAATGCAATAATGATAGAGGTATTTCTAGCGAGATCACCGAAATCCGTAGAACAAGTAGTTTCTCTTGTTTATCTGGTGCAGCCTTAAGTGCAAATGCTACACTAGCCAACACAAACATCTGCAATGGTAAGATAGGTGGAGAGATCCTTCCGAGTTGGGACTCTCCTAATTCGTTTCGTAGAGTACCTTCTTCGCCAAGTCATTCACGGTTGGATAGATTATCGTCTTCCCTCCCAAATAGTCTCTCTTACCTTAGTTGCAGTCCATCAACTGCTAGTGACAGCCTTGAATACGAGTTGAAATCTGCGAGTGATCGTTCCAGTAGCGACGGATTTCTTATTGCCACTGAAGTTCAAGTAGCAGGAGGAGCTGCAGGCGAAGATAGAGTTCAAGCGGTTTGTTCTGAAGAAAATGGCTGGCTCTTTTGCGCAATTTATGACGGGTTTAATGGAAGAGATGCTGCTGATTTTCTAGCAGGTACCCTTTACGACACCATCATATCTTATCTAGATAAGTTAATTTGGGAATTGGAGCCAGGTTCCACCGCAGCTTCCAATCACGCGGATTTGGGTGAATTCTTTCGATATAAGTTGGACGATAGTCTTCATTGTCACGAGGGTCGTTCTCAGTCAAGCACATCGCGCGAGTCTTTTTCGCGTGGAGTACTTGATAGCCTCGAACATGCTCTCAGTCAGGCTGAGAACGATTTCTTATACATGGTTGAGCAGGAAATGGTGGAACGTCCGGATTTAGTTTCGATTGGATCTTGTGTTCTGCTTTTGCTTCTTCATGGTAATGATTTGTATACATTGAATCTTGGAGACAGTAGAGCAGTATTGGCGACATGCAGTAACGATGACAGAATGAGTAAGACTGAAAGACTCGAGACTATACAGCTTACAGATAATCACACCGTCGATAACGAAGCTGAAAAAGCTAGACTCATTGCTGAACATCCTGATGATCCTAAGGTCGTCATAGCAGGAAAAGTGAAAGGTAAATTGAAGGTCACTCGTGCATTCGGAGTTGGCTACTTAAAAAAGAAAAATCTGAATGATGCTTTGATGGGAATCCTTAGAGTTCGCGACCTTACGAGCCCACCATATGTTTCCACTCAACCATCACTAAATGTCCATAAAATCTCAAACTCCGATCAATTTGTTATAGTAGGGAGCGATGGTTTATTCGACTTTTTCAGCAATGAAGAGGCGGTGACACTTGTTGAGTCTTACATCATAAGCAATCCTTTTGGGGATCCTGCAAAGTTTCTCATAGAGCAACTTGTAGCTAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCGGCCGGAAGGAGAAGAAAGTACCATGATGATGTTACTGTAATAGTGATCATGCTTGGGATGAATCAACGGACTTCAAAAGCTTCAACTTGCATCTAA 1743 0.4188 MPLLCFNVDTYSPLLGSHDQNIFSLCSLHLCDLLSHTPTLSPFLYKLTISLLSFCIACHILNSTILLSYFVFTSSSSSHLRLITEERNMLSPEGEIKITFGYKCNNDRGISSEITEIRRTSSFSCLSGAALSANATLANTNICNGKIGGEILPSWDSPNSFRRVPSSPSHSRLDRLSSSLPNSLSYLSCSPSTASDSLEYELKSASDRSSSDGFLIATEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYLDKLIWELEPGSTAASNHADLGEFFRYKLDDSLHCHEGRSQSSTSRESFSRGVLDSLEHALSQAENDFLYMVEQEMVERPDLVSIGSCVLLLLLHGNDLYTLNLGDSRAVLATCSNDDRMSKTERLETIQLTDNHTVDNEAEKARLIAEHPDDPKVVIAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLTSPPYVSTQPSLNVHKISNSDQFVIVGSDGLFDFFSNEEAVTLVESYIISNPFGDPAKFLIEQLVARAADSAGFSMEELMNVPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01169 580 Gene3D - 186 576 IPR036457 -
Vivi1g01169 580 PANTHER PROTEIN PHOSPHATASE 2C 208 565 IPR015655 GO:0004722|GO:0006470
Vivi1g01169 580 SUPERFAMILY PP2C-like 227 568 IPR036457 -
Vivi1g01169 580 ProSiteProfiles PPM-type phosphatase domain profile. 214 567 IPR001932 -
Vivi1g01169 580 SMART PP2C_4 201 565 IPR001932 -
Vivi1g01169 580 Pfam Protein phosphatase 2C 306 522 IPR001932 -
Vivi1g01169 580 CDD PP2Cc 227 565 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01169 Vivi-Chr1 24457152 24459881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01169 92 580 PP2C-type Phosphatase Gene Family AT3G16560 62.475 0.0 583
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01169 1 24457152 24459881 Vivi4g02697 4 128912311 128915295 PCT