Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01160 ATGGAGGATTTATTAGGGCAAACGTGGAAGGACAGAGAGTTCACTCTCTCGTCGGTTACGGAACTCTCTTCCGATGCTTCCGAGGCTTCTCCGGGAATCGCTCGTTTCACCTCCGATGGTCTACAGATTCATCAGCAATCTCAGGAGATTTCTCTCAATTTTGATCTCCGAACTTCTCAGATATTCAAATTGGGACCTGTTCAATCCGTTTGCATTATGGAAGGCTCTGATGTCGGTAAAGCGGCATCGTATTCTACTGGAGTCACTATCCAGTTTAAAAACGAGGAGGAATGCGAGGCTTTTCATTCTGTTGTCCAACAATGGATAAAGAAAGCCAATGTTCAAGGGAGCTTACCAAATGGAACTTTAACAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGTCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTTCATCAGCAAAATATGTTGCAGGACTATGTGCGGACAGGTACTTATTACGCTGCGGTTATTGAGAACCGGGCTGATTTTACCGGCCGTGTAGTAGTTGACGTGGGTGCTGGTAGCGGTATTTTGTCATTATTTGCTGCCCAGGCCGGTGCAAAGCATGTTTATGCTGTGGAAGCGTCTGAAATGGCAGAATATGCCCGGAAACTTATAGCAGGAAACCCAAAACTGGCTCAACGAATTACAGTGATTAAAGGTAAAGTTGAGGATGTTGAGTTGCCAGAGAAAGCAGATATTCTCATCTCGGAGCCCATGGGCACTTTGTTAGTTAATGAGAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACTCCTACTGGGAAAATGTTTCCTGGGGTGGGAAGGATTCACATGGCACCTTTCACCGATGAATATTTGTTCATTGAAATTGCTAACAAGGCCCTGTTCTGGCAGCAGCAAAACTATTATGGTGTTGATTTGACACCCTTACATGGGACTGCATTTCAAGGATATTTTTCCCAGCCTGTGGTGGATGCTTTTGATCCAAGATTGTTAATAGCTCCCCCGATGTTCCATGTATTAGACTTCACCAAAATGAAGGAAGAAGATTTGTATGAAATTGACATTCCTCTGAGATTCATTGCCTCTGTGGGCACCAGAGTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACCGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCACCCACAACCCACTGGTACCAGTTACGCTGTGTTCTCTCGCAGCCAATTTATGTCATGGCAGGGCAAGAAATTACTGGCAGGCTTCATTTGGTTGCCCATAATGCACAGAGTTATACAATACATTTAACATTGTCTGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGAGGGATTATTCAAACATCTTCATGCAAGCTTGATTTGAAAGAACCCTACTATAGAATGTCCCAAGCACAAGCTTATCCTTTAGCCCAAGATCAGCAATCTCAACCACTTGTACAGACACAGGATATAAATATCCAATCACATGAATTGGAAGAACCAGAAATAATGCAACAGATTTCGCCTAATTCATGTGCTCAGATTGATTCGCTGATGCAGAAGATTTAA 1605 0.4299 MEDLLGQTWKDREFTLSSVTELSSDASEASPGIARFTSDGLQIHQQSQEISLNFDLRTSQIFKLGPVQSVCIMEGSDVGKAASYSTGVTIQFKNEEECEAFHSVVQQWIKKANVQGSLPNGTLTTSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPKLAQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPGVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPPMFHVLDFTKMKEEDLYEIDIPLRFIASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLVAHNAQSYTIHLTLSAKMWGPGAEQGGIIQTSSCKLDLKEPYYRMSQAQAYPLAQDQQSQPLVQTQDINIQSHELEEPEIMQQISPNSCAQIDSLMQKI 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01160 534 Gene3D Vaccinia Virus protein VP39 121 282 IPR029063 -
Vivi1g01160 534 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 135 450 IPR025799 GO:0016274|GO:0018216
Vivi1g01160 534 Pfam Ribosomal protein L11 methyltransferase (PrmA) 177 251 - -
Vivi1g01160 534 CDD AdoMet_MTases 181 281 - -
Vivi1g01160 534 FunFam Probable histone-arginine methyltransferase CARM1 284 492 - -
Vivi1g01160 534 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 145 456 IPR029063 -
Vivi1g01160 534 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 76 471 IPR025799 GO:0016274|GO:0018216
Vivi1g01160 534 Gene3D - 284 492 - -
Vivi1g01160 534 FunFam Probable histone-arginine methyltransferase CARM1 122 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01160 Vivi-Chr1 24359221 24365726 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01160 142 450 C2H2 Transcription Factor Family AT3G12270 32.733 6.34e-39 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01160 K05931 - gmx:100780736 942.954