Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01158 ATGGAGGATTTATTAGGGCAAACGTGGAAGGACAGAGAGTTCACTCTCTCGTCGGTTACGGAACTCTCTTCCGATGCTTCCGAGGCTTCTCCGGGAATCGCTCGTTTCACCTCCGATGGTCTACAGATTCATCAGCAATCTCAGGAGATTTCTCTCAATTTTGATCTCCGAACTTCTCAGATATTCAAATTGGGACCTGTTCAATCCGTTTGCATTATGGAAGGCTCTGATGTCGGTAAAGCGGCATCGTATTCTACTGGAGTCACTATCCAGTTTAAAAACGAGGAGGAATGCGAGGCTTTTCATTCTGTTGTCCAACAATGGATAAAGAAAGCCAATGTTCAAGCAGGGAGCTTACCAAATGGAACTTTAACAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGTCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTTCATCAGCAAAATATGTTGCAGGACTATGTGCGGACAGGTACTTATTACGCTGCGGTTATTGAGAACCGGGCTGATTTTACCGGCCGTGTAGTAGTTGACGTGGGTGCTGGTAGCGGTATTTTGTCATTATTTGCTGCCCAGGCCGGTGCAAAGCATGTTTATGCTGTGGAAGCGTCTGAAATGGCAGAATATGCCCGGAAACTTATAGCAGGAAACCCAAAACTGGCTCAACGAATTACAGTGATTAAAGGTAAAGTTGAGGATGTTGAGTTGCCAGAGAAAGCAGATATTCTCATCTCGGAGCCCATGGGCACTTTGTTAGTTAATGAGAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACTCCTACTGGGAAAATGTTTCCTGGGGTGGGAAGGATTCACATGGCACCTTTCACCGATGAATATTTGTTCATTGAAATTGCTAACAAGGCCCTGTTCTGGCAGCAGCAAAACTATTATGGTGTTGATTTGACACCCTTACATGGGACTGCATTTCAAGGATATTTTTCCCAGCCTGTGGTGGATGCTTTTGATCCAAGATTGTTAATAGCTCCCCCGATGTTCCATGTATTAGACTTCACCAAAATGAAGGAAGAAGATTTGTATGAAATTGACATTCCTCTGAGATTCATTGCCTCTGTGGGCACCAGAGTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACCGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCACCCACAACCCACTGGTACCAGTTACGCTGTGTTCTCTCGCAGCCAATTTATGTCATGGCAGGGCAAGAAATTACTGGCAGGCTTCATTTGGTTGCCCATAATGCACAGAGTTATACAATACATTTAACATTGTCTGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGAGGGATTATTCAAACATCTTCATGCAAGCTTGATTTGAAAGAACCCTACTATAGAATGTCCCAAGCACAAGCTTATCCTTTAGCCCAAGATCAGCAATCTCAACCACTTGTACAGACACAGTGA 1509 0.4361 MEDLLGQTWKDREFTLSSVTELSSDASEASPGIARFTSDGLQIHQQSQEISLNFDLRTSQIFKLGPVQSVCIMEGSDVGKAASYSTGVTIQFKNEEECEAFHSVVQQWIKKANVQAGSLPNGTLTTSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPKLAQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPGVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPPMFHVLDFTKMKEEDLYEIDIPLRFIASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLVAHNAQSYTIHLTLSAKMWGPGAEQGGIIQTSSCKLDLKEPYYRMSQAQAYPLAQDQQSQPLVQTQ 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01158 502 Pfam Ribosomal protein L11 methyltransferase (PrmA) 178 252 - -
Vivi1g01158 502 Gene3D Vaccinia Virus protein VP39 122 283 IPR029063 -
Vivi1g01158 502 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 457 IPR029063 -
Vivi1g01158 502 Gene3D - 285 493 - -
Vivi1g01158 502 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Vivi1g01158 502 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 79 472 IPR025799 GO:0016274|GO:0018216
Vivi1g01158 502 FunFam Probable histone-arginine methyltransferase CARM1 123 283 - -
Vivi1g01158 502 CDD AdoMet_MTases 182 282 - -
Vivi1g01158 502 FunFam Probable histone-arginine methyltransferase CARM1 285 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01158 Vivi-Chr1 24359221 24365728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01158 143 451 C2H2 Transcription Factor Family AT3G12270 32.733 6.17e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01158 K05931 - gmx:100780736 900.582