Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01155 ATGGAAGACCCTCAATATCCAAACAACCCTCCCCCACCCTATCAACACCAACGCGCTTCCGTTCCCACTCCACCGTCGCATCAGTCCGACAACGATCACACCACCGCAGAGTTACGCGCTCTCGATTGCAACCTCGCTTCCCTCTGCGAACATGTCCAAATTGAAGGTTTCAATTCCGGCTCCTTCTCCGATATCGTCGTTAATGCTATGGGCTCCGCTTATCACCTCCATCGCCTCATCCTCTCTCGTAGTTCATATTTCAGGAATATGCTTCATGGTCCATGGAAGGAAGCTAGTGCTCCTATAGTGACCTTACATATTGATGATAAGAATGTTAATGAAGAGGCAATTTCAATTGCTTTGGCGTATCTTTATGGAAGCCACCCTAAACTTAATGACGATAATGCCTTTCGTGTCCTTGCTGCTGCTTCCTTTCTTGACCTTCAGGATTTATGTGCTATATGTACAGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCTGAGAACCAAGATTACGGCATCCATGGGGAGCGTGTTAGAACTGCTTGTTGGGGATACCTTTGTCAAAGTGGCGGCATAGAATTGAGAGAGGTGCTTCCTAAACTTTCATCTAATACATTACATGCATTACTAACCTCTAATGACCTGTGGGTACCCTGTGAAGAGAAGCGGTTTGAATTGGCTTTGCACACATTCCTGGCAAAAAGTGCTCACTACAAGGTTGAACATCCTGCACATGGAGTTCCTGGTTCTGAGTCGGCAACTGGCATTCATTCTGATAACACCAAGGGAAAAGGTATAGCTGATAGCTGTACTAACGAGAGGTTGGAAACTGACTTGGGGAAATTGAGTCTTAAAAGTGATCTAAAGGACCCTAACATATCTAATCTTTTCGCCGAGCTTGCAGACTCAGTAGTAGACTTCAACAATGACATTTCTGATTCCAATCGAGTTCAACTTGCTTCATATGTCAGTTCATCAAACACAAACCCTAGATATTCGTGTGACACGGAAGGACCTTCATTGGGTAATTCATTGTCTGACACAGATGGGCCTCTTGGTGCTGGAGTAACTACTGGAGTGGGTATTGAAGGGCCTTCTGAGGAAGGGTCTTGCTACCTTTCGGATAACAGCAATAGGTTGGTGAGGGATCAATCAAGACACTGTTTTTCAACTAGTTCTTGTAATGGGCTCACATCCAGTGAGTGGGGAAGGTATGGAGCACCTTTGCTCTCATGGGGTGGCCATGTTGGCAGAAGACAGGTCAAAGCTCATTCCAGAGGAAACTATGGAGATGAAGATAATGTATTTCTTAATATATTTGAAGGGGGCTCACTTTTATATTGCAGTATGTCTTTTGATGCACTTTTAAATGTCAGAAAGCAGCTTGAAGAGATAGGATTCCCTTGCAAAGCTGTAAATGATGGTTTGTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAGATTGCTGCCGATACATGCAGAGTTTGTTCCCTTATGACTATGTCTTGTACTTGCCACAAGCAGTTTGCATTTGTACATGGATCTACTACTACTGGATCTTACATGCAAGAACATAATCATAGCAATATCCCTGGGGGTGGAGGAAATATATATGTCGCTGAATCTTCTACAGGCGAAAGAAATGGCTCCTTTAGACCTGTACGAGTACATGTTAGAGGTGCTAATGACGGGCTTGCAGGTATTGGCCGTGGGACTACATTTGTTCCTGCAGCGGCTTCACCTCCTACACGATTTGTCTTTTCTCGTGTACCATTTGGCATTGGCAACAGAAACTACCCTCAATCTGCTGCCAATGACGATTCTGACACACGTGCTGATCACAATGGAGACTTGTCTGGAGATGGATTGACAGCTTTAGTTGGGCTAAGCCAGGGAGGGAATTATGGAACAAATGTACATACAGAGCTAATACAAAGGGGGCACGAAATTGGCTTGCAAAGTACTGCTGGAGGTGCAAGTAGTGGTGGCATTCCAGTACAAATGTTAGAGACACCAGAACATACCATTGGTGTAGAATGGGAAAATGACAACAGTTCTTCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTCCCCCCTTTTCGCTTTGGTGTAAGTTTTGAAGAAGTGCACAGGCTTAGCGATGGCCAGGTCAAGCATTCACCAGAAGTTTTCTATGCCGGTTCTTTATGGAAGGTCAGTATTCAGGCTTTTAATGATGAAGATCCCCAAGGACGCCGCACCCTAGGGTTGTTTCTTCACCGTCGGAAGGCAGAGATAACTGATTTATACAGGAAGGCACATATGTATGTTGACTCACGTGAAAAGGTGACCGCCCGGTATCAGTTGACTTGCCCATCCAAGAGGGAAATGTTGGTTTTTGGAAGCTTTAAACAAACAGGCACTCTTCTACCTAAAGCTCCAAAAGGATGGGGTTGGCGAACTGCTTTGCTATTTGATGAGCTTGCTGATCTTCTCCAAAATGGGGCCCTAAGGGTTATTGCTGTGGTGCAGCTTGTTTGA 2556 0.4464 MEDPQYPNNPPPPYQHQRASVPTPPSHQSDNDHTTAELRALDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSAYHLHRLILSRSSYFRNMLHGPWKEASAPIVTLHIDDKNVNEEAISIALAYLYGSHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGIELREVLPKLSSNTLHALLTSNDLWVPCEEKRFELALHTFLAKSAHYKVEHPAHGVPGSESATGIHSDNTKGKGIADSCTNERLETDLGKLSLKSDLKDPNISNLFAELADSVVDFNNDISDSNRVQLASYVSSSNTNPRYSCDTEGPSLGNSLSDTDGPLGAGVTTGVGIEGPSEEGSCYLSDNSNRLVRDQSRHCFSTSSCNGLTSSEWGRYGAPLLSWGGHVGRRQVKAHSRGNYGDEDNVFLNIFEGGSLLYCSMSFDALLNVRKQLEEIGFPCKAVNDGLWLQMLLSQRVQEIAADTCRVCSLMTMSCTCHKQFAFVHGSTTTGSYMQEHNHSNIPGGGGNIYVAESSTGERNGSFRPVRVHVRGANDGLAGIGRGTTFVPAAASPPTRFVFSRVPFGIGNRNYPQSAANDDSDTRADHNGDLSGDGLTALVGLSQGGNYGTNVHTELIQRGHEIGLQSTAGGASSGGIPVQMLETPEHTIGVEWENDNSSSISLDLKTPLSHFPPFRFGVSFEEVHRLSDGQVKHSPEVFYAGSLWKVSIQAFNDEDPQGRRTLGLFLHRRKAEITDLYRKAHMYVDSREKVTARYQLTCPSKREMLVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01155 851 MobiDBLite consensus disorder prediction 252 278 - -
Vivi1g01155 851 MobiDBLite consensus disorder prediction 1 33 - -
Vivi1g01155 851 MobiDBLite consensus disorder prediction 262 276 - -
Vivi1g01155 851 MobiDBLite consensus disorder prediction 337 358 - -
Vivi1g01155 851 Pfam BTB/POZ domain 57 161 IPR000210 GO:0005515
Vivi1g01155 851 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 16 851 - -
Vivi1g01155 851 SMART BTB_4 63 163 IPR000210 GO:0005515
Vivi1g01155 851 Gene3D Potassium Channel Kv1.1; Chain A 31 196 IPR011333 -
Vivi1g01155 851 ProSiteProfiles BTB domain profile. 63 133 IPR000210 GO:0005515
Vivi1g01155 851 MobiDBLite consensus disorder prediction 1 19 - -
Vivi1g01155 851 SUPERFAMILY POZ domain 57 161 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01155 Vivi-Chr1 24327905 24334635 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vivi1g01155 BTB 2.2e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01155 - - tpra:123882109 1542.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01155 1 24327905 24334635 Vivi1g01155 1 24327905 24334635 ECH