Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01154 ATGGAAGACCCTCAATATCCAAACAACCCTCCCCCACCCTATCAACACCAACGCGCTTCCGTTCCCACTCCACCGTCGCATCAGTCCGACAACGATCACACCACCGCAGAGTTACGCGCTCTCGATTGCAACCTCGCTTCCCTCTGCGAACATGTCCAAATTGAAGGTTTCAATTCCGGCTCCTTCTCCGATATCGTCGTTAATGCTATGGGCTCCGCTTATCACCTCCATCGCCTCATCCTCTCTCGTAGTTCATATTTCAGGAATATGCTTCATGGTCCATGGAAGGAAGCTAGTGCTCCTATAGTGACCTTACATATTGATGATAAGAATGTTAATGAAGAGGCAATTTCAATTGCTTTGGCGTATCTTTATGGAAGCCACCCTAAACTTAATGACGATAATGCCTTTCGTGTCCTTGCTGCTGCTTCCTTTCTTGACCTTCAGGATTTATGTGCTATATGTACAGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCTGAGAACCAAGATTACGGCATCCATGGGGAGCGTGTTAGAACTGCTTGTTGGGGATACCTTTGTCAAAGTGGCGGCATAGAATTGAGAGAGGTGCTTCCTAAACTTTCATCTAATACATTACATGCATTACTAACCTCTAATGACCTGTGGGTACCCTGTGAAGAGAAGCGGTTTGAATTGGCTTTGCACACATTCCTGGCAAAAAGTGCTCACTACAAGGTTGAACATCCTGCACATGGAGTTCCTGGTTCTGAGTCGGCAACTGGCATTCATTCTGATAACACCAAGGGAAAAGACTCAGTAGTAGACTTCAACAATGACATTTCTGATTCCAATCGAGTTCAACTTGCTTCATATGTCAGTTCATCAAACACAAACCCTAGATATTCGTGTGACACGGAAGGACCTTCATTGGGTAATTCATTGTCTGACACAGATGGGCCTCTTGGTGCTGGAGTAACTACTGGAGTGGGTATTGAAGGGCCTTCTGAGGAAGGGTCTTGCTACCTTTCGGATAACAGCAATAGGTTGGTGAGGGATCAATCAAGACACTGTTTTTCAACTAGTTCTTGTAATGGGCTCACATCCAGTGAGTGGGGAAGGTATGGAGCACCTTTGCTCTCATGGGGTGGCCATGTTGGCAGAAGACAGGTCAAAGCTCATTCCAGAGGAAACTATGGAGATGAAGATAATGTATTTCTTAATATATTTGAAGGGGGCTCACTTTTATATTGCAGTATGTCTTTTGATGCACTTTTAAATGTCAGAAAGCAGCTTGAAGAGATAGGATTCCCTTGCAAAGCTGTAAATGATGGTTTGTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAGATTGCTGCCGATACATGCAGAGTTTGTTCCCTTATGACTATGTCTTGTACTTGCCACAAGCAGTTTGCATTTGTACATGGATCTACTACTACTGGATCTTACATGCAAGAACATAATCATAGCAATATCCCTGGGGGTGGAGGAAATATATATGTCGCTGAATCTTCTACAGGCGAAAGAAATGGCTCCTTTAGACCTGTACGAGTACATGTTAGAGGTGCTAATGACGGGCTTGCAGGTATTGGCCGTGGGACTACATTTGTTCCTGCAGCGGCTTCACCTCCTACACGATTTGTCTTTTCTCGTGTACCATTTGGCATTGGCAACAGAAACTACCCTCAATCTGCTGCCAATGACGATTCTGACACACGTGCTGATCACAATGGAGACTTGTCTGGAGATGGATTGACAGCTTTAGTTGGGCTAAGCCAGGGAGGGAATTATGGAACAAATGTACATACAGAGCTAATACAAAGGGGGCACGAAATTGGCTTGCAAAGTACTGCTGGAGGTGCAAGTAGTGGTGGCATTCCAGTACAAATGTTAGAGACACCAGAACATACCATTGGTGTAGAATGGGAAAATGACAACAGTTCTTCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTCCCCCCTTTTCGCTTTGGTGTAAGTTTTGAAGAAGTGCACAGGCTTAGCGATGGCCAGGTCAAGCATTCACCAGAAGTTTTCTATGCCGGTTCTTTATGGAAGGTCAGTATTCAGGCTTTTAATGATGAAGATCCCCAAGGACGCCGCACCCTAGGGTTGTTTCTTCACCGTCGGAAGGCAGAGATAACTGATTTATACAGGAAGGCACATATGTATGTTGACTCACGTGAAAAGGTGACCGCCCGGTATCAGTTGACTTGCCCATCCAAGAGGGAAATGTTGGTTTTTGGAAGCTTTAAACAAACAGGCACTCTTCTACCTAAAGCTCCAAAAGGATGGGGTTGGCGAACTGCTTTGCTATTTGATGAGCTTGCTGATCTTCTCCAAAATGGGGCCCTAAGGGTTATTGCTGTGGTGCAGCTTGTTTGA 2445 0.4479 MEDPQYPNNPPPPYQHQRASVPTPPSHQSDNDHTTAELRALDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSAYHLHRLILSRSSYFRNMLHGPWKEASAPIVTLHIDDKNVNEEAISIALAYLYGSHPKLNDDNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGIELREVLPKLSSNTLHALLTSNDLWVPCEEKRFELALHTFLAKSAHYKVEHPAHGVPGSESATGIHSDNTKGKDSVVDFNNDISDSNRVQLASYVSSSNTNPRYSCDTEGPSLGNSLSDTDGPLGAGVTTGVGIEGPSEEGSCYLSDNSNRLVRDQSRHCFSTSSCNGLTSSEWGRYGAPLLSWGGHVGRRQVKAHSRGNYGDEDNVFLNIFEGGSLLYCSMSFDALLNVRKQLEEIGFPCKAVNDGLWLQMLLSQRVQEIAADTCRVCSLMTMSCTCHKQFAFVHGSTTTGSYMQEHNHSNIPGGGGNIYVAESSTGERNGSFRPVRVHVRGANDGLAGIGRGTTFVPAAASPPTRFVFSRVPFGIGNRNYPQSAANDDSDTRADHNGDLSGDGLTALVGLSQGGNYGTNVHTELIQRGHEIGLQSTAGGASSGGIPVQMLETPEHTIGVEWENDNSSSISLDLKTPLSHFPPFRFGVSFEEVHRLSDGQVKHSPEVFYAGSLWKVSIQAFNDEDPQGRRTLGLFLHRRKAEITDLYRKAHMYVDSREKVTARYQLTCPSKREMLVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01154 814 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 16 814 - -
Vivi1g01154 814 SUPERFAMILY POZ domain 57 161 IPR011333 -
Vivi1g01154 814 MobiDBLite consensus disorder prediction 1 33 - -
Vivi1g01154 814 Gene3D Potassium Channel Kv1.1; Chain A 31 196 IPR011333 -
Vivi1g01154 814 MobiDBLite consensus disorder prediction 296 321 - -
Vivi1g01154 814 Pfam BTB/POZ domain 57 161 IPR000210 GO:0005515
Vivi1g01154 814 SMART BTB_4 63 163 IPR000210 GO:0005515
Vivi1g01154 814 MobiDBLite consensus disorder prediction 571 590 - -
Vivi1g01154 814 MobiDBLite consensus disorder prediction 262 279 - -
Vivi1g01154 814 ProSiteProfiles BTB domain profile. 63 133 IPR000210 GO:0005515
Vivi1g01154 814 MobiDBLite consensus disorder prediction 252 279 - -
Vivi1g01154 814 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01154 Vivi-Chr1 24327900 24334635 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vivi1g01154 BTB 2e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01154 - - tpra:123882109 1476.07