Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01152 ATGGGCGGCCAGATGCATCAGAGCAATGCTGCCGCGGCTGCTCTGTATGACCACGCCGGCGCTGTACCTTTGCACGGTGCAGCGGCAGGGACTGCAACCGATGCCGGCGATGCTGTTATGGCACGCTGGTTGCAATCTGCCGGCTTACAGCATCTGGCCTCTCCGTTGGCTTCAAATGCAATTGATCAACGCCTTCTCCCCAATCTTCTTATGCAGGGTTATGGAGCACAGTCTGCTGAAGAAAAACAGAGGCTTTTTAAGTTGATGAGAGGTCTCAATTTTAATGGGGAATCTGGTTCAGAGCCATATACACCCACTTCCCAAAATTTAGGTGGAGTGGCTGTATCAGATGGGTTTTATTCTCCTGACTTTAGGGGGGATTTTGGAGCCGGTCTTATGGATCTTCATGCTATGGATGATACAGAGCTTTTGTCTGAGCATGTTATCTCAGAACCCTTTGAGCCATCACCCTTTATGCCTGGAGGCACCAGAGAATTTGAAGACGACTTCAACTCAGTCAGCAGCAAGCAGGAAGGAGAAGCAATTGCTGATGCGTCACATTTTTTACCAGTGCAGGAAAAAGACAGTAATACAAGAGAAAATAATGTTGCTAAAATAAAAGTTGTGGTACGCAAAAGACCTTTAAATAAAAAGGAGCTTGCTAAGAAGGAGGATGATGTTGTAACGGTTTACGACAATGCATATTTGACTGTTCATGAGCCTAAAGTGAAGGTTGATTTGACAGCTTATGTCGAGAAGCATGAATTTTGTTTTGATGCTGTTATTGATGAGAATGTTACCAATGATGAAGTATATCGAGTTACAGTAGAACCTATTATTCCTACAATTTTCGAGAGGACAAAAGCTACCTGTTTTGCATATGGTCAGACAGGAAGTGGCAAAACATTTACAATGCAACCATTACCACTCAGAGCTGCAAATGACCTTGTTAGACAGTTGCATCGACCAGTTTACCGAAATCAGAAATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAATTGTATGATCTTCTTGGTGACAGGAAGAAACTCTTAATGAGAGAAGATGGACGGCAGCAAGTTTGTATTGTAGGACTACAAGAATTTGAAGTTTCTGATGTACAGATTGTCAAAGAATTCATCGAAAAAGGGAATGCAGCAAGGAGTACAGGATCCACTGGCGCGAATGAGGAGTCCTCCAGGTCACATGCTATCTTACAGTTGGTTGTAAAGAGGCACAATGAAGTAAAAGAGAGCAGGAGAAAGAATGATGAAAATGATACAAAAAGTGGGAAGGTTGTGGGGAAGATTTCTTTCATTGATCTTGCTGGAAGTGAAAGAGGTGCTGACACTACTGACAATGACCGTCAAACAAGGATTGAAGGAGCAGAAATTAACAAGAGTCTTTTAGCTTTGAAAGAGTGCATTCGAGCTTTGGACAATGACCAGATCCATATTCCTTTTCGTGGAAGTAAACTTACGGAAGTACTCCGTGACTCTTTCGTTGGCAATTCAAAGACTGTCATGATCTCTTGTATATCTCCAAATGCAGGATCTTGCGAACACACACTCAATACCTTGAGATATGCTGATCGAGTCAAGAGTCTGTCAAAAAGTGGAAATTCTAGAAAGGACCAAGCCCCAAATCCAGTACCACAGTCCAATAAAGAGGTTTTATCCACATCGTCCCTTCCAGACAGTGCTTGTGCCGAGGATTTTTATGATCAACGTCAACAGGTGAGAACAGTGGATACGGGCAGGAAAGCTATCGAGAAGGAACCCTCTTTGTACAGCTCTGCCGCTGATGTTGACAAGCAACCATCGAGTTTTTCTTCCAGTTTTGGGCGAGAGGAGAAAGGTTTGCCTTCTGTCTCAATGGACAGGAATAGGCTTGAAATGAAGAATGTGACTAGTCAAAAGATGAACCCTTATTCTCAAAATGATGTGGATGAGAAAGTGCTAAAGGTATCTCCCCCACGAAGAAAAGGGACCAAGGAGGAGAAACCTGAAAGGTCCTTGAACTGGACAAAAAGGGATGCCAATGGTTCTGATCATTTTGTCGCAAGCTCCAAGCAGCAAAGCACGGGGAGTTTTAACTCAGTTACCACTAGATCCAGGCAGCCTGAAACTGAATCCTCTCCTGATGTGAATAACAGTGCTGTCCTTGAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTCCGTGATGAAATGAAACTATTAGCAGAAGTGGACCAGCCTGGAAGTATTATTGACAACTATGTAACCCAGCTGAGTTTTGTGCTATCTCGCAAAGCAGCTAGTCTTGTAAGTCTCCAGGCTCGCCTTGCGAGGTTTCAACATCGACTAAAAGAACAGGAGATACTAAGCCGAAAAAGAGTACCCCGATAA 2427 0.4343 MGGQMHQSNAAAAALYDHAGAVPLHGAAAGTATDAGDAVMARWLQSAGLQHLASPLASNAIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRGLNFNGESGSEPYTPTSQNLGGVAVSDGFYSPDFRGDFGAGLMDLHAMDDTELLSEHVISEPFEPSPFMPGGTREFEDDFNSVSSKQEGEAIADASHFLPVQEKDSNTRENNVAKIKVVVRKRPLNKKELAKKEDDVVTVYDNAYLTVHEPKVKVDLTAYVEKHEFCFDAVIDENVTNDEVYRVTVEPIIPTIFERTKATCFAYGQTGSGKTFTMQPLPLRAANDLVRQLHRPVYRNQKFKLWLSYFEIYGGKLYDLLGDRKKLLMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKRHNEVKESRRKNDENDTKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNSRKDQAPNPVPQSNKEVLSTSSLPDSACAEDFYDQRQQVRTVDTGRKAIEKEPSLYSSAADVDKQPSSFSSSFGREEKGLPSVSMDRNRLEMKNVTSQKMNPYSQNDVDEKVLKVSPPRRKGTKEEKPERSLNWTKRDANGSDHFVASSKQQSTGSFNSVTTRSRQPETESSPDVNNSAVLEEEEALIAAHRKEIEDTMEIVRDEMKLLAEVDQPGSIIDNYVTQLSFVLSRKAASLVSLQARLARFQHRLKEQEILSRKRVPR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01152 808 Coils Coil 781 801 - -
Vivi1g01152 808 PANTHER KINESIN-RELATED PROTEIN 6 33 806 IPR027640 GO:0003777|GO:0007018
Vivi1g01152 808 Pfam Kinesin motor domain 211 538 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g01152 808 MobiDBLite consensus disorder prediction 596 721 - -
Vivi1g01152 808 PRINTS Kinesin heavy chain signature 286 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g01152 808 PRINTS Kinesin heavy chain signature 489 510 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g01152 808 PRINTS Kinesin heavy chain signature 396 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g01152 808 PRINTS Kinesin heavy chain signature 439 457 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g01152 808 SMART kinesin_4 203 545 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g01152 808 MobiDBLite consensus disorder prediction 604 621 - -
Vivi1g01152 808 MobiDBLite consensus disorder prediction 539 565 - -
Vivi1g01152 808 Gene3D Kinesin motor domain 182 542 IPR036961 -
Vivi1g01152 808 ProSiteProfiles Kinesin motor domain profile. 205 539 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g01152 808 ProSitePatterns Kinesin motor domain signature. 438 449 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vivi1g01152 808 FunFam Kinesin-like protein 185 542 - -
Vivi1g01152 808 Coils Coil 725 756 - -
Vivi1g01152 808 MobiDBLite consensus disorder prediction 656 681 - -
Vivi1g01152 808 MobiDBLite consensus disorder prediction 686 721 - -
Vivi1g01152 808 MobiDBLite consensus disorder prediction 633 649 - -
Vivi1g01152 808 CDD KISc_KIF2_like 205 537 - -
Vivi1g01152 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 539 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01152 Vivi-Chr1 24295324 24302656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01152 197 539 Calmodulin-binding Proteins AT5G65930 34.561 5.19e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01152 K10393 - gmx:100778915 1350.88