Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01114 ATGGTTATTGATACACCTGTTATGGGTTATGTGTCTACTTCTTTTACGATTATCTTTCCTGAAACTGGTGCCAAAGAAGACGTGTTTTTGTCTGCTAAGCAAGTTGATGAATTTGTGCAAGATAGTGCAGAGTTGTTTATTTTGTTGGCAACTTTAGATGTTCATGAGAAGAGAACAATTGAAGAATTTCCAATAGTTTGTGATTTTGCCGAGGGTGTTCTTGCGAAAGATGAGTTTGAAAAAAGTGTGTTGGGTGAAGTTATTTCCCCGAGTGAAATTGGGTCGTGCAAGGGTATCTTGCTTTTTGGTCCTCCTAGTACAGGAAAAACAATGTTAGCCAAGACGATGGCAACCGAACCAGGGGAAAATTTCATAAATATTTCATTATCAAAAGTTACTTCCAAGTATCACGAGGATACTGAAAAGTATGTTGAAGCTGTGTTTTCTGTCGACCGCATGTTAGGCAAGAGGGTAACTGATTCCAATAATTCTATGTATAATGGGGTGAAGACAAAAAATTTAGCACAATGGGATAGTCTCAGTACAAAAGAGGAAAATAGTGTTCTTGTTTTGGCAGCTACCAATGGCCCGTTTGATTTTGACGAGGCGGTTGTTAGGAGACTTCCTCGAAGGTATATGTTGAATTTACTCGATGCCGCAAACTGTGAGAAAATTCTGAAAGTTATATTGGGGAAAGAACAATTGGCATCAGATGTGAATTTAACAGAATTGACTAATAGGACAGAGAGTTATTATGAGAATGATCTTAAGTATTTGTGCATGGAAGCTGCTCATATCCATATAAGAGAGATATTGGAGAAAGAGAAACAATTGAAAGTATCATATAGTAGTGCAGATATTCGTCCTTTAAAGATGAATGATTTTTCGCTTTCAGGAAAAGAGTTTGCGGGATCGGATAAATTCAACATATACCTTCGAGGAAGTCTCCTAACAACTGCCTCGTCAAGATCAAACGGACGATTGGTAGCTGCCAAAACAAGACACGATTTTCCTCTCTAA 1020 0.3794 MVIDTPVMGYVSTSFTIIFPETGAKEDVFLSAKQVDEFVQDSAELFILLATLDVHEKRTIEEFPIVCDFAEGVLAKDEFEKSVLGEVISPSEIGSCKGILLFGPPSTGKTMLAKTMATEPGENFINISLSKVTSKYHEDTEKYVEAVFSVDRMLGKRVTDSNNSMYNGVKTKNLAQWDSLSTKEENSVLVLAATNGPFDFDEAVVRRLPRRYMLNLLDAANCEKILKVILGKEQLASDVNLTELTNRTESYYENDLKYLCMEAAHIHIREILEKEKQLKVSYSSADIRPLKMNDFSLSGKEFAGSDKFNIYLRGSLLTTASSRSNGRLVAAKTRHDFPL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01114 339 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 96 302 - -
Vivi1g01114 339 Pfam ATPase family associated with various cellular activities (AAA) 99 213 IPR003959 GO:0005524|GO:0016887
Vivi1g01114 339 Gene3D - 217 299 - -
Vivi1g01114 339 Gene3D - 95 216 IPR027417 -
Vivi1g01114 339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 276 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01114 Vivi-Chr1 23571674 23579149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01114 98 283 Calmodulin-binding Proteins AT3G56690 30.918 1.80e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01114 - - vvo:131662349 664.07