Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01112 ATGAATTCCAATTACGGCAAATCAAATTCAAATCCCCAAAAATCATCTGTTTCTCTCAACAACTTCAACTTCGATCTTGATCTCGGAATCGGATCCAACCGATCCAAATCCCTAAAAGATCAGAAAAACCCCAATCCTTCCTATTCCAATTCATACTCAACTCCTTCGTATTCATCGGCGCAACCCAAAAAAACTACATGGACCCACCAACCCACGCAAACTCCGGCCGGATTACCCGGCGCACCACCGTCCATGGTCGGAGACATCTTCGGAAAGAGCTGGGGATCTACTCAACCTTCCGGTCCTAGCATTGGAATCGTTAATAAAAACCCTAATCTGTTTGGGGATTTGGTTACCTCTGCTTTGGGTCAAGGTTCTTCTTCTTCTTCTTCGAATGTTCCTCTGAAAAATGCTACTCCAGTGGCTAATAAATCGTCATTTTCAATGTCGAATATGGCGAATTCTTTGCCGAAAAATTCGAATACGCCGCAAAGTGGTAGTGGTTCTACTTGGGGATCATCAGCTTCTGGGAGCTTTAATTTGAATGCTAGTCAAAAACCCAATCTTGGAGGTCCTTCGATTCGAAGTGGCGTTGGTGTTGCTGCATCTGGTAGTGGAACTGGAATTGGAATTGGAAGTGGAATCGGTTCGAATAACAAAGATCCTTTTAGTTCATTGGGTGGCTTTGGATCTAAGCCATCTTCTAGTCTTAATTCAGCTGCTAAACCGCAGAAGATTGATTCAGAAGATGATGGGTTTGGTGATTTTCAGAATGCTTCAAAACCAAGCAACAATGCATTTCCATCAAGTGGTGGTGGTAGTGTTGGATTTGATGTTGATTTTAGTGGAACTTCGGCTTTTTCGAATAGGACTCCTCCTGTTCAAGCTTCTTCAGGTGGTGGTGGTGATCCGATGGATATGTTTTTCGCATCTTCAACTGCTTCTTCTGGTGGTGGAGGTGGTGGTGGTTCTGCTGCAGCGGCGTCTTCGGAGATTGATGATTGGGGTACTGAGTTTGGAGGTGGAAACCATGATGTGGGTGGAACAACTACTGAACTTGATGGGCTTCCACCTCCTCCTGCTGGGATATCGGGTTCTACTGCGAAAGGCAAAGGGATGGATAATTACAAACAGGGACAATTTGCGGATGCTATTAAATGGCTTTCGTGGGCTCTCATCCTTTTAGAGAAAGCTGGAGATGGTGCTGGTACAGTGGAGGTTTTGTCGTGCAGAGCTTCTTGTTACAAAGAAGTTGGAGAGTATAAAAAAGCAGTGGCTGATTGTACACAGGTTATTGGAAACAACAACAAAAACGTTGCTGTCCTTGTTCAGCGTGCTCTCTTGTATGAAAGTATGGAAAAGTACAAACTTGGTGCTGAAGATCTGAGAACCGTGCTGAAGATTGATCCTACTAATAGGGTTGCTAGAAGTACTGTTCATCGGTTGGCTAAGATGGCTGAATAG 1464 0.4433 MNSNYGKSNSNPQKSSVSLNNFNFDLDLGIGSNRSKSLKDQKNPNPSYSNSYSTPSYSSAQPKKTTWTHQPTQTPAGLPGAPPSMVGDIFGKSWGSTQPSGPSIGIVNKNPNLFGDLVTSALGQGSSSSSSNVPLKNATPVANKSSFSMSNMANSLPKNSNTPQSGSGSTWGSSASGSFNLNASQKPNLGGPSIRSGVGVAASGSGTGIGIGSGIGSNNKDPFSSLGGFGSKPSSSLNSAAKPQKIDSEDDGFGDFQNASKPSNNAFPSSGGGSVGFDVDFSGTSAFSNRTPPVQASSGGGGDPMDMFFASSTASSGGGGGGGSAAAASSEIDDWGTEFGGGNHDVGGTTTELDGLPPPPAGISGSTAKGKGMDNYKQGQFADAIKWLSWALILLEKAGDGAGTVEVLSCRASCYKEVGEYKKAVADCTQVIGNNNKNVAVLVQRALLYESMEKYKLGAEDLRTVLKIDPTNRVARSTVHRLAKMAE 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01112 487 MobiDBLite consensus disorder prediction 222 243 - -
Vivi1g01112 487 MobiDBLite consensus disorder prediction 1 20 - -
Vivi1g01112 487 SUPERFAMILY TPR-like 369 477 IPR011990 GO:0005515
Vivi1g01112 487 MobiDBLite consensus disorder prediction 148 191 - -
Vivi1g01112 487 MobiDBLite consensus disorder prediction 257 271 - -
Vivi1g01112 487 MobiDBLite consensus disorder prediction 91 107 - -
Vivi1g01112 487 SMART tpr_5 365 398 IPR019734 GO:0005515
Vivi1g01112 487 SMART tpr_5 439 472 IPR019734 GO:0005515
Vivi1g01112 487 SMART tpr_5 405 438 IPR019734 GO:0005515
Vivi1g01112 487 MobiDBLite consensus disorder prediction 30 75 - -
Vivi1g01112 487 MobiDBLite consensus disorder prediction 30 107 - -
Vivi1g01112 487 MobiDBLite consensus disorder prediction 285 329 - -
Vivi1g01112 487 PANTHER OS03G0340700 PROTEIN 1 487 - -
Vivi1g01112 487 MobiDBLite consensus disorder prediction 222 272 - -
Vivi1g01112 487 Gene3D Tetratricopeptide repeat domain 365 486 IPR011990 GO:0005515
Vivi1g01112 487 MobiDBLite consensus disorder prediction 148 192 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01112 380 487 Calmodulin-binding Proteins AT3G25230 29.464 1.17e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01112 - - pvu:PHAVU_003G107800g 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01112 1 23495792 23499188 Vivi1g01112 1 23495792 23499188 ECH